HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:40.8 nTPM
HPA:40.8 nTPM
GTEx:33.6 nTPM
FANTOM5:34.7 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:63.9 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039932Antibody HPA040065
Glial cells Not detectedNot detected
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.8
Sample id Sample description nTPM
Hippocampus
nTPM: 33.4
2529 Female, age 94, left hemisphere 40.9
1855 Male, age 76, left hemisphere 36.2
1911 Female, age 85, right hemisphere 32.2
1898 Male, age 80, left hemisphere 31.0
2148 Female, age 91, left hemisphere 30.9
2621 Female, age 67, right hemisphere 29.4
Dentate gyrus
nTPM: 35.3
2010 Male, age 76, both hemispheres 46.3
2530 Female, age 94, left hemisphere 35.0
2531 Female, age 67, both hemispheres 33.7
1927 Female, age 91, both hemispheres 32.9
2246 Female, age 85, both hemispheres 32.0
2528 Male, age 74, both hemispheres 31.8
Entorhinal gyrus
nTPM: 33.2
1787 Male, age 76, left hemisphere 39.3
2686 Male, age 75, right hemisphere 34.9
1938 Female, age 85, left hemisphere 32.0
2764 Male, age 80, right hemisphere 31.8
2613 Female, age 94, left hemisphere 31.3
2117 Female, age 91, right hemisphere 30.2
Hippocampus, CA1
nTPM: 40.8
2045 Male, age 76, both hemispheres 67.3
2749 Male, age 80, left hemisphere 36.5
2082 Female, age 91, right hemisphere 35.6
2527 Male, age 74, both hemispheres 32.7
1873 Female, age 85, both hemispheres 32.1
Hippocampus, CA2
nTPM: 38.7
1892 Male, age 76, both hemispheres 61.1
2437 Female, age 94, left hemisphere 36.8
2249 Male, age 74, both hemispheres 35.3
2113 Female, age 91, right hemisphere 34.9
1963 Male, age 80, left hemisphere 32.4
1940 Female, age 85, left hemisphere 31.6
Hippocampus, CA3
nTPM: 36.2
1867 Male, age 76, both hemispheres 60.1
2137 Male, age 80, left hemisphere 32.7
1891 Female, age 85, both hemispheres 32.1
2620 Female, age 94, left hemisphere 31.9
2436 Male, age 74, both hemispheres 30.6
2861 Female, age 67, both hemispheres 29.9
Parahippocampal cortex
nTPM: 33.6
2018 Male, age 76, both hemispheres 43.1
2250 Female, age 67, right hemisphere 39.8
1990 Female, age 91, right hemisphere 33.5
2693 Female, age 94, both hemispheres 32.7
2245 Female, age 91, both hemispheres 32.5
2622 Female, age 67, right hemisphere 31.9
2692 Male, age 74, both hemispheres 31.3
1850 Male, age 80, both hemispheres 30.9
1933 Female, age 85, both hemispheres 30.4
2532 Female, age 72, left hemisphere 30.1
Perirhinal gyrus
nTPM: 37.8
2848 Male, age 76, right hemisphere 58.8
2521 Female, age 94, right hemisphere 33.9
1794 Male, age 80, right hemisphere 33.1
1841 Female, age 85, right hemisphere 32.8
1847 Female, age 91, left hemisphere 30.2
Subiculum
nTPM: 36.0
2042 Male, age 76, both hemispheres 56.5
2438 Female, age 94, left hemisphere 34.7
1901 Male, age 80, both hemispheres 32.9
1977 Female, age 85, both hemispheres 31.4
2729 Female, age 91, right hemisphere 31.1
2619 Male, age 74, both hemispheres 29.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 54.0
Min nTPM: 16.9
Std nTPM: 6.3
Median nTPM: 33.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 53.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 48.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 47.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 46.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 45.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 44.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 44.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 43.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.7
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 28.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.9
Min nTPM: 10.9
Sample A Female 16.9
Sample B Female 13.2
Sample C Male 13.6
Sample D Male 10.9
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 16.1
Min nTPM: 9.1
Sample A Female 12.1
Sample B Female 16.1
Sample C Male 13.3
Sample D Male 9.1
Subiculum
nTPM: 11.0
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.1
Sample A Female 12.9
Sample B Female 10.7
Sample C Male 10.2
Sample D Male 10.1
Ventral hippocampus
nTPM: 11.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 9.8
Sample A Female 12.5
Sample B Female 9.8
Sample C Male 13.2
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 62.8
Min nTPM: 47.6
Sample A Male 57.1
Sample B Male 62.8
Sample C Female 60.4
Sample D Female 47.6
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 76.6
Min nTPM: 56.6
Sample A Male 76.6
Sample B Male 61.6
Sample C Female 60.5
Sample D Female 56.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
70445455 Antisense, RP_050614_03_H02, Mouse strain C57BL/6J (56 days, male) 4.7

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