HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.8 nTPM
HPA:43.8 nTPM
GTEx:29.3 nTPM
FANTOM5:123.3 Scaled Tags Per Million
Pig:35.7 nTPM
Mouse:23.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039381
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.5
1898 Male, age 80, left hemisphere 40.2
1911 Female, age 85, right hemisphere 37.8
1855 Male, age 76, left hemisphere 36.2
2529 Female, age 94, left hemisphere 36.1
2148 Female, age 91, left hemisphere 34.7
2621 Female, age 67, right hemisphere 34.2
Dentate gyrus
nTPM: 39.1
2530 Female, age 94, left hemisphere 48.9
2010 Male, age 76, both hemispheres 41.7
1927 Female, age 91, both hemispheres 37.5
2246 Female, age 85, both hemispheres 37.2
2531 Female, age 67, both hemispheres 37.0
2528 Male, age 74, both hemispheres 32.2
Entorhinal gyrus
nTPM: 43.8
2764 Male, age 80, right hemisphere 46.2
2613 Female, age 94, left hemisphere 45.8
1938 Female, age 85, left hemisphere 44.9
2686 Male, age 75, right hemisphere 42.3
1787 Male, age 76, left hemisphere 41.9
2117 Female, age 91, right hemisphere 41.7
Hippocampus, CA1
nTPM: 38.4
2749 Male, age 80, left hemisphere 45.4
1873 Female, age 85, both hemispheres 40.8
2045 Male, age 76, both hemispheres 37.8
2527 Male, age 74, both hemispheres 34.8
2082 Female, age 91, right hemisphere 33.2
Hippocampus, CA2
nTPM: 36.2
1963 Male, age 80, left hemisphere 45.8
1892 Male, age 76, both hemispheres 37.8
2437 Female, age 94, left hemisphere 34.6
2249 Male, age 74, both hemispheres 34.2
1940 Female, age 85, left hemisphere 32.5
2113 Female, age 91, right hemisphere 32.2
Hippocampus, CA3
nTPM: 34.3
1891 Female, age 85, both hemispheres 43.4
1867 Male, age 76, both hemispheres 36.7
2137 Male, age 80, left hemisphere 36.6
2620 Female, age 94, left hemisphere 31.0
2861 Female, age 67, both hemispheres 30.2
2436 Male, age 74, both hemispheres 27.9
Parahippocampal cortex
nTPM: 38.9
1850 Male, age 80, both hemispheres 47.2
2532 Female, age 72, left hemisphere 44.9
1990 Female, age 91, right hemisphere 43.6
2692 Male, age 74, both hemispheres 41.0
1933 Female, age 85, both hemispheres 40.2
2018 Male, age 76, both hemispheres 38.4
2245 Female, age 91, both hemispheres 36.2
2693 Female, age 94, both hemispheres 36.2
2622 Female, age 67, right hemisphere 32.5
2250 Female, age 67, right hemisphere 28.6
Perirhinal gyrus
nTPM: 39.6
2848 Male, age 76, right hemisphere 45.0
1794 Male, age 80, right hemisphere 40.7
1847 Female, age 91, left hemisphere 40.7
1841 Female, age 85, right hemisphere 37.8
2521 Female, age 94, right hemisphere 34.0
Subiculum
nTPM: 40.7
1901 Male, age 80, both hemispheres 46.5
1977 Female, age 85, both hemispheres 46.2
2438 Female, age 94, left hemisphere 45.8
2042 Male, age 76, both hemispheres 43.2
2619 Male, age 74, both hemispheres 31.5
2729 Female, age 91, right hemisphere 31.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.3
Samples: 197

Max nTPM: 82.7
Min nTPM: 1.6
Std nTPM: 11.6
Median nTPM: 27.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 82.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 71.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 69.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 60.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 57.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 55.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 53.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 53.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 50.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 50.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.3
FF:10169-103B7 60 years, female 127.6
FF:10153-102I9 76 years, female 119.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 50.1
Min nTPM: 26.2
Sample A Female 50.1
Sample B Female 33.5
Sample C Male 33.1
Sample D Male 26.2
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.2
Sample A Female 18.1
Sample B Female 23.7
Sample C Male 16.2
Sample D Male 20.2
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 26.0
Min nTPM: 17.8
Sample A Female 26.0
Sample B Female 22.8
Sample C Male 17.8
Sample D Male 23.9
Ventral hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 45.4
Min nTPM: 22.2
Sample A Female 45.4
Sample B Female 22.2
Sample C Male 28.7
Sample D Male 42.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.7
Samples: 4

Max nTPM: 21.2
Min nTPM: 16.3
Sample A Male 20.4
Sample B Male 21.2
Sample C Female 16.3
Sample D Female 16.9
Hippocampal formation
nTPM: 23.1
Samples: 4

Max nTPM: 28.3
Min nTPM: 17.7
Sample A Male 25.0
Sample B Male 17.7
Sample C Female 28.3
Sample D Female 21.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
79632219 Antisense, RP_071018_01_H01, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.