HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:29.2 nTPM
HPA:29.2 nTPM
GTEx:25.9 nTPM
FANTOM5:21.8 Scaled Tags Per Million
Mouse:29.9 nTPM
Allen mouse:12.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012624Antibody HPA012895
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
1898 Male, age 80, left hemisphere 29.7
2148 Female, age 91, left hemisphere 29.5
2621 Female, age 67, right hemisphere 28.3
1911 Female, age 85, right hemisphere 28.2
2529 Female, age 94, left hemisphere 27.9
1855 Male, age 76, left hemisphere 27.1
Dentate gyrus
nTPM: 29.2
2530 Female, age 94, left hemisphere 33.2
1927 Female, age 91, both hemispheres 29.7
2531 Female, age 67, both hemispheres 29.1
2010 Male, age 76, both hemispheres 28.8
2246 Female, age 85, both hemispheres 27.0
2528 Male, age 74, both hemispheres 27.0
Entorhinal gyrus
nTPM: 28.3
2764 Male, age 80, right hemisphere 30.4
2613 Female, age 94, left hemisphere 29.9
1787 Male, age 76, left hemisphere 28.8
2686 Male, age 75, right hemisphere 27.7
2117 Female, age 91, right hemisphere 26.9
1938 Female, age 85, left hemisphere 26.2
Hippocampus, CA1
nTPM: 28.7
2749 Male, age 80, left hemisphere 29.9
1873 Female, age 85, both hemispheres 29.6
2082 Female, age 91, right hemisphere 28.8
2527 Male, age 74, both hemispheres 28.3
2045 Male, age 76, both hemispheres 27.0
Hippocampus, CA2
nTPM: 29.1
1963 Male, age 80, left hemisphere 30.7
1892 Male, age 76, both hemispheres 30.2
2437 Female, age 94, left hemisphere 29.7
2249 Male, age 74, both hemispheres 28.2
2113 Female, age 91, right hemisphere 28.1
1940 Female, age 85, left hemisphere 27.9
Hippocampus, CA3
nTPM: 29.0
1867 Male, age 76, both hemispheres 30.1
2436 Male, age 74, both hemispheres 30.0
2861 Female, age 67, both hemispheres 29.5
2137 Male, age 80, left hemisphere 28.7
2620 Female, age 94, left hemisphere 28.1
1891 Female, age 85, both hemispheres 27.6
Parahippocampal cortex
nTPM: 27.8
2622 Female, age 67, right hemisphere 29.2
2250 Female, age 67, right hemisphere 28.5
1933 Female, age 85, both hemispheres 28.0
2693 Female, age 94, both hemispheres 28.0
1990 Female, age 91, right hemisphere 27.8
2018 Male, age 76, both hemispheres 27.7
2245 Female, age 91, both hemispheres 27.7
1850 Male, age 80, both hemispheres 27.1
2532 Female, age 72, left hemisphere 26.9
2692 Male, age 74, both hemispheres 26.6
Perirhinal gyrus
nTPM: 27.9
2521 Female, age 94, right hemisphere 28.7
1794 Male, age 80, right hemisphere 28.1
1847 Female, age 91, left hemisphere 27.7
1841 Female, age 85, right hemisphere 27.6
2848 Male, age 76, right hemisphere 27.2
Subiculum
nTPM: 28.2
2438 Female, age 94, left hemisphere 29.3
1901 Male, age 80, both hemispheres 28.8
1977 Female, age 85, both hemispheres 28.2
2619 Male, age 74, both hemispheres 27.9
2729 Female, age 91, right hemisphere 27.9
2042 Male, age 76, both hemispheres 27.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 197

Max nTPM: 42.0
Min nTPM: 8.7
Std nTPM: 5.7
Median nTPM: 25.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 42.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 41.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 41.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 37.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 36.9
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 36.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 36.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 36.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 36.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 35.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.8
FF:10153-102I9 76 years, female 25.8
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 24.8
Min nTPM: 23.3
Sample A Male 24.8
Sample B Male 23.3
Sample C Female 23.9
Sample D Female 24.5
Hippocampal formation
nTPM: 29.9
Samples: 4

Max nTPM: 31.3
Min nTPM: 28.5
Sample A Male 28.5
Sample B Male 28.7
Sample C Female 31.3
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.7
67815938 Antisense, RP_040920_02_B02, Mouse strain C57BL/6J (56 days, male) 12.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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