HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.1 nTPM
HPA:33.1 nTPM
GTEx:15.9 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:112.8 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011215Antibody CAB009623
Glial cells MediumMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.7
2148 Female, age 91, left hemisphere 50.1
2621 Female, age 67, right hemisphere 32.6
1911 Female, age 85, right hemisphere 27.4
1855 Male, age 76, left hemisphere 23.6
1898 Male, age 80, left hemisphere 23.2
2529 Female, age 94, left hemisphere 21.0
Dentate gyrus
nTPM: 32.7
1927 Female, age 91, both hemispheres 47.5
2531 Female, age 67, both hemispheres 35.0
2010 Male, age 76, both hemispheres 32.4
2528 Male, age 74, both hemispheres 29.3
2246 Female, age 85, both hemispheres 26.1
2530 Female, age 94, left hemisphere 26.0
Entorhinal gyrus
nTPM: 19.9
2764 Male, age 80, right hemisphere 22.1
2613 Female, age 94, left hemisphere 21.6
2686 Male, age 75, right hemisphere 20.2
1938 Female, age 85, left hemisphere 19.5
1787 Male, age 76, left hemisphere 18.4
2117 Female, age 91, right hemisphere 17.8
Hippocampus, CA1
nTPM: 33.1
2749 Male, age 80, left hemisphere 46.3
1873 Female, age 85, both hemispheres 39.9
2045 Male, age 76, both hemispheres 34.6
2527 Male, age 74, both hemispheres 24.4
2082 Female, age 91, right hemisphere 20.2
Hippocampus, CA2
nTPM: 23.3
1963 Male, age 80, left hemisphere 46.3
1892 Male, age 76, both hemispheres 22.9
2249 Male, age 74, both hemispheres 19.9
2113 Female, age 91, right hemisphere 19.6
2437 Female, age 94, left hemisphere 17.6
1940 Female, age 85, left hemisphere 13.5
Hippocampus, CA3
nTPM: 30.8
2620 Female, age 94, left hemisphere 50.2
2861 Female, age 67, both hemispheres 37.2
2137 Male, age 80, left hemisphere 30.1
1891 Female, age 85, both hemispheres 27.4
1867 Male, age 76, both hemispheres 21.7
2436 Male, age 74, both hemispheres 18.0
Parahippocampal cortex
nTPM: 18.5
2018 Male, age 76, both hemispheres 22.5
2692 Male, age 74, both hemispheres 21.2
1990 Female, age 91, right hemisphere 20.3
2622 Female, age 67, right hemisphere 19.2
1850 Male, age 80, both hemispheres 18.6
2245 Female, age 91, both hemispheres 18.2
2532 Female, age 72, left hemisphere 17.5
1933 Female, age 85, both hemispheres 16.3
2693 Female, age 94, both hemispheres 16.3
2250 Female, age 67, right hemisphere 15.4
Perirhinal gyrus
nTPM: 15.9
1847 Female, age 91, left hemisphere 17.6
1794 Male, age 80, right hemisphere 17.1
2848 Male, age 76, right hemisphere 15.4
2521 Female, age 94, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.7
Subiculum
nTPM: 20.3
2729 Female, age 91, right hemisphere 25.9
1901 Male, age 80, both hemispheres 21.2
2619 Male, age 74, both hemispheres 20.4
2042 Male, age 76, both hemispheres 20.1
2438 Female, age 94, left hemisphere 17.6
1977 Female, age 85, both hemispheres 16.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 32.9
Min nTPM: 2.3
Std nTPM: 5.2
Median nTPM: 15.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 31.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 30.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 29.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 28.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 28.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 26.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 26.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 26.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 25.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 25.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.5
FF:10153-102I9 76 years, female 39.1
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.2
Min nTPM: 13.0
Sample A Female 21.2
Sample B Female 17.9
Sample C Male 13.0
Sample D Male 20.5
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.0
Min nTPM: 7.2
Sample A Female 8.0
Sample B Female 7.7
Sample C Male 7.2
Sample D Male 7.3
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.3
Sample A Female 13.1
Sample B Female 12.1
Sample C Male 14.4
Sample D Male 10.3
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 13.4
Sample A Female 20.2
Sample B Female 13.4
Sample C Male 23.2
Sample D Male 17.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.9
Samples: 4

Max nTPM: 63.6
Min nTPM: 29.6
Sample A Male 42.0
Sample B Male 29.6
Sample C Female 63.6
Sample D Female 48.3
Hippocampal formation
nTPM: 112.8
Samples: 4

Max nTPM: 148.5
Min nTPM: 72.1
Sample A Male 72.1
Sample B Male 129.7
Sample C Female 148.5
Sample D Female 101.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
69735980 Antisense, RP_050503_03_H07, Mouse strain C57BL/6J (56 days, male) 6.9

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