HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:29.8 nTPM
HPA:29.8 nTPM
GTEx:30.2 nTPM
FANTOM5:49.4 Scaled Tags Per Million
Mouse:25.6 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047839
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.8
Sample id Sample description nTPM
Hippocampus
nTPM: 27.5
1855 Male, age 76, left hemisphere 34.4
1911 Female, age 85, right hemisphere 29.2
2529 Female, age 94, left hemisphere 26.9
2621 Female, age 67, right hemisphere 25.3
1898 Male, age 80, left hemisphere 25.1
2148 Female, age 91, left hemisphere 24.1
Dentate gyrus
nTPM: 27.5
2010 Male, age 76, both hemispheres 34.3
2528 Male, age 74, both hemispheres 28.3
2246 Female, age 85, both hemispheres 27.3
2530 Female, age 94, left hemisphere 25.6
2531 Female, age 67, both hemispheres 25.1
1927 Female, age 91, both hemispheres 24.1
Entorhinal gyrus
nTPM: 26.3
1787 Male, age 76, left hemisphere 29.3
2117 Female, age 91, right hemisphere 28.5
1938 Female, age 85, left hemisphere 27.1
2686 Male, age 75, right hemisphere 25.3
2613 Female, age 94, left hemisphere 24.4
2764 Male, age 80, right hemisphere 23.1
Hippocampus, CA1
nTPM: 26.4
2045 Male, age 76, both hemispheres 29.4
2082 Female, age 91, right hemisphere 28.1
1873 Female, age 85, both hemispheres 26.8
2527 Male, age 74, both hemispheres 26.5
2749 Male, age 80, left hemisphere 21.0
Hippocampus, CA2
nTPM: 28.4
2249 Male, age 74, both hemispheres 40.8
1940 Female, age 85, left hemisphere 33.6
2113 Female, age 91, right hemisphere 26.1
2437 Female, age 94, left hemisphere 25.4
1963 Male, age 80, left hemisphere 23.6
1892 Male, age 76, both hemispheres 20.6
Hippocampus, CA3
nTPM: 29.8
2436 Male, age 74, both hemispheres 57.7
1891 Female, age 85, both hemispheres 27.2
2620 Female, age 94, left hemisphere 26.4
2861 Female, age 67, both hemispheres 24.0
1867 Male, age 76, both hemispheres 22.2
2137 Male, age 80, left hemisphere 21.3
Parahippocampal cortex
nTPM: 25.7
2693 Female, age 94, both hemispheres 28.6
2250 Female, age 67, right hemisphere 26.8
2692 Male, age 74, both hemispheres 26.5
2532 Female, age 72, left hemisphere 25.6
1990 Female, age 91, right hemisphere 25.4
1933 Female, age 85, both hemispheres 25.2
2245 Female, age 91, both hemispheres 25.0
1850 Male, age 80, both hemispheres 24.8
2622 Female, age 67, right hemisphere 24.8
2018 Male, age 76, both hemispheres 24.7
Perirhinal gyrus
nTPM: 26.3
1841 Female, age 85, right hemisphere 27.7
2848 Male, age 76, right hemisphere 27.4
2521 Female, age 94, right hemisphere 26.6
1794 Male, age 80, right hemisphere 26.2
1847 Female, age 91, left hemisphere 23.7
Subiculum
nTPM: 26.9
2438 Female, age 94, left hemisphere 28.5
2042 Male, age 76, both hemispheres 27.5
2619 Male, age 74, both hemispheres 27.3
1977 Female, age 85, both hemispheres 26.9
2729 Female, age 91, right hemisphere 26.4
1901 Male, age 80, both hemispheres 24.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.2
Samples: 197

Max nTPM: 173.7
Min nTPM: 8.2
Std nTPM: 24.4
Median nTPM: 22.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 173.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 165.0
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 152.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 120.8
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 117.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 105.3
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 103.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 96.3
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 75.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 65.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.4
FF:10153-102I9 76 years, female 56.0
FF:10169-103B7 60 years, female 42.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 26.8
Min nTPM: 23.2
Sample A Male 26.8
Sample B Male 23.2
Sample C Female 24.7
Sample D Female 26.0
Hippocampal formation
nTPM: 25.6
Samples: 4

Max nTPM: 27.9
Min nTPM: 22.8
Sample A Male 25.9
Sample B Male 22.8
Sample C Female 27.9
Sample D Female 25.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
69817019 Antisense, RP_050510_02_D10, Mouse strain C57BL/6J (56 days, male) 14.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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