COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:38.6 nTPM
HPA:26.6 nTPM
GTEx:38.6 nTPM
FANTOM5:37.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA021453Antibody HPA045649
Endothelial cells Not detectedLow
Glandular cells MediumMedium
Peripheral nerve/ganglion LowNot detected





COLON - HPA RNA-seqi
Average nTPM 26.6
overview
Male, age 54 		Colon sample 67
nTPM: 23.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 22.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 26.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 25.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 20.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 30
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 28.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 29.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 27.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 30.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 31.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 29.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 19.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 38.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 38.0
Samples: 373

Max nTPM: 78.7
Min nTPM: 21.6
Std nTPM: 8.9
Median nTPM: 36.2
GTEX-16MTA-1626-SM-6M47N 50-59 years, male 78.7
GTEX-14E1K-1626-SM-664MO 50-59 years, male 75.2
GTEX-1LSNM-1426-SM-E6CIH 50-59 years, male 63.2
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 61.0
GTEX-1IKOE-2126-SM-A96T5 30-39 years, female 60.2
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 60.1
GTEX-1LGRB-2026-SM-COH47 50-59 years, female 59.3
GTEX-1R7EU-1826-SM-DTX9L 60-69 years, male 59.2
GTEX-1H3VY-2526-SM-9KNW1 50-59 years, male 58.8
GTEX-1MGNQ-2126-SM-EV7AC 40-49 years, male 58.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 57.6
Show allShow less
Colon - Transverse
Average nTPM: 38.6
Samples: 406

Max nTPM: 71.5
Min nTPM: 21.6
Std nTPM: 8.7
Median nTPM: 38.0
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 71.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 70.5
GTEX-14JIY-3326-SM-6871E 60-69 years, male 68.8
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 64.8
GTEX-14E1K-1826-SM-793DT 50-59 years, male 62.6
GTEX-1J1R8-1126-SM-CNPQ3 40-49 years, male 61.1
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 59.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 59.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 58.7
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 58.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 58.1
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 37.2
FF:10014-101C5 62,83,84 years, mixed 37.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.