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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:58.2 nTPM
GTEx:58.2 nTPM
FANTOM5:77.0 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA021453Antibody HPA045649
Squamous epithelial cells Not detectedMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 58.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 58.2
Samples: 156

Max nTPM: 178.0
Min nTPM: 19.6
Std nTPM: 33.0
Median nTPM: 49.1
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 178.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 170.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 147.6
GTEX-11I78-2026-SM-5987C 50-59 years, female 142.4
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 142.2
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 134.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 128.9
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 128.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 122.1
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 119.8
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 118.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 116.4
GTEX-S341-1226-SM-4AD5S 40-49 years, female 110.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 108.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 107.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 105.3
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 103.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 102.7
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 100.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 99.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 99.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 95.3
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 95.2
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 92.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 91.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 91.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 90.2
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 89.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 88.9
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 85.4
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 84.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 82.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 81.7
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 80.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 78.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 78.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 78.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 77.3
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 76.5
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 76.3
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 75.1
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 74.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 73.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 72.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 70.8
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 70.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 70.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 69.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 68.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 68.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 68.6
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 66.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 66.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 62.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 62.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 62.6
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 61.0
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 60.0
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 60.0
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 58.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 58.4
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 58.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 57.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 56.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 56.4
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 56.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 55.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 55.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 54.0
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 52.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 52.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 52.4
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 52.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 52.0
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 51.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 51.7
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 50.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 50.1
GTEX-16NPV-2526-SM-6M483 50-59 years, female 48.1
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 47.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 47.0
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 46.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 46.1
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 45.5
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 45.2
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 44.8
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 44.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 43.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 43.5
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 42.4
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 41.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 40.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 39.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 39.4
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 38.7
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 38.5
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 38.5
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 38.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 37.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 37.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 36.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 35.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 35.4
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 34.7
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 34.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 34.3
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 34.3
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 34.2
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 34.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 33.8
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 33.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 32.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 32.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 32.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 32.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 32.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 31.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 31.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 31.3
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 31.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 31.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 31.0
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 31.0
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 30.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 30.4
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 30.0
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 29.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 29.6
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 29.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 29.5
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 28.6
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 28.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 28.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 27.9
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 27.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 26.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 26.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 26.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 26.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 25.8
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 25.4
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 25.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 24.9
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 24.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 24.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 24.7
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 24.5
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 24.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 24.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 23.8
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 23.5
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 23.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 22.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 22.0
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 21.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 19.6
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 77.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 77.0
FF:10204-103F6 68 years, female 77.0

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