HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:17.0 nTPM
HPA:17.0 nTPM
GTEx:16.7 nTPM
FANTOM5:63.4 Scaled Tags Per Million
Mouse:45.4 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004479Antibody HPA004480
Glial cells MediumLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.0
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
1898 Male, age 80, left hemisphere 18.4
1855 Male, age 76, left hemisphere 14.3
2148 Female, age 91, left hemisphere 13.7
2529 Female, age 94, left hemisphere 13.7
2621 Female, age 67, right hemisphere 13.4
1911 Female, age 85, right hemisphere 12.3
Dentate gyrus
nTPM: 14.8
1927 Female, age 91, both hemispheres 16.8
2010 Male, age 76, both hemispheres 15.6
2530 Female, age 94, left hemisphere 15.2
2528 Male, age 74, both hemispheres 14.4
2246 Female, age 85, both hemispheres 13.8
2531 Female, age 67, both hemispheres 13.2
Entorhinal gyrus
nTPM: 14.8
2764 Male, age 80, right hemisphere 17.5
2613 Female, age 94, left hemisphere 15.2
1938 Female, age 85, left hemisphere 14.1
2117 Female, age 91, right hemisphere 14.1
1787 Male, age 76, left hemisphere 13.9
2686 Male, age 75, right hemisphere 13.8
Hippocampus, CA1
nTPM: 15.3
2749 Male, age 80, left hemisphere 19.9
1873 Female, age 85, both hemispheres 15.4
2527 Male, age 74, both hemispheres 14.7
2045 Male, age 76, both hemispheres 13.3
2082 Female, age 91, right hemisphere 13.2
Hippocampus, CA2
nTPM: 15.3
1963 Male, age 80, left hemisphere 18.4
1892 Male, age 76, both hemispheres 17.8
2249 Male, age 74, both hemispheres 16.1
1940 Female, age 85, left hemisphere 13.2
2113 Female, age 91, right hemisphere 13.2
2437 Female, age 94, left hemisphere 13.2
Hippocampus, CA3
nTPM: 15.8
2436 Male, age 74, both hemispheres 18.3
2137 Male, age 80, left hemisphere 16.5
1867 Male, age 76, both hemispheres 16.3
1891 Female, age 85, both hemispheres 16.3
2620 Female, age 94, left hemisphere 15.3
2861 Female, age 67, both hemispheres 12.2
Parahippocampal cortex
nTPM: 14.8
1850 Male, age 80, both hemispheres 17.9
1933 Female, age 85, both hemispheres 16.9
1990 Female, age 91, right hemisphere 16.3
2250 Female, age 67, right hemisphere 15.4
2532 Female, age 72, left hemisphere 14.2
2693 Female, age 94, both hemispheres 14.1
2018 Male, age 76, both hemispheres 13.9
2245 Female, age 91, both hemispheres 13.6
2692 Male, age 74, both hemispheres 13.2
2622 Female, age 67, right hemisphere 12.7
Perirhinal gyrus
nTPM: 17.0
1847 Female, age 91, left hemisphere 20.0
1794 Male, age 80, right hemisphere 18.5
1841 Female, age 85, right hemisphere 16.8
2521 Female, age 94, right hemisphere 16.7
2848 Male, age 76, right hemisphere 12.8
Subiculum
nTPM: 13.9
1901 Male, age 80, both hemispheres 16.7
1977 Female, age 85, both hemispheres 15.0
2619 Male, age 74, both hemispheres 14.2
2042 Male, age 76, both hemispheres 13.2
2729 Female, age 91, right hemisphere 12.9
2438 Female, age 94, left hemisphere 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.7
Samples: 197

Max nTPM: 31.3
Min nTPM: 7.1
Std nTPM: 4.8
Median nTPM: 16.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 30.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 28.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 27.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 27.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 26.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 25.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 25.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.4
FF:10169-103B7 60 years, female 82.6
FF:10153-102I9 76 years, female 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.4
Samples: 4

Max nTPM: 48.9
Min nTPM: 42.2
Sample A Male 44.7
Sample B Male 45.9
Sample C Female 42.2
Sample D Female 48.9
Hippocampal formation
nTPM: 42.2
Samples: 4

Max nTPM: 44.3
Min nTPM: 40.9
Sample A Male 40.9
Sample B Male 44.3
Sample C Female 42.8
Sample D Female 40.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
70445568 Antisense, RP_050614_04_B03, Mouse strain C57BL/6J (56 days, male) 13.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.