HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:25.6 nTPM
HPA:25.6 nTPM
GTEx:20.4 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:13.3 nTPM
Mouse:30.8 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066240
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
2529 Female, age 94, left hemisphere 26.5
1911 Female, age 85, right hemisphere 26.3
2621 Female, age 67, right hemisphere 26.2
1898 Male, age 80, left hemisphere 25.6
1855 Male, age 76, left hemisphere 24.2
2148 Female, age 91, left hemisphere 23.4
Dentate gyrus
nTPM: 24.7
2530 Female, age 94, left hemisphere 25.6
2528 Male, age 74, both hemispheres 25.1
2246 Female, age 85, both hemispheres 24.7
2531 Female, age 67, both hemispheres 24.5
2010 Male, age 76, both hemispheres 24.4
1927 Female, age 91, both hemispheres 23.8
Entorhinal gyrus
nTPM: 24.7
2686 Male, age 75, right hemisphere 27.4
2117 Female, age 91, right hemisphere 25.8
1787 Male, age 76, left hemisphere 25.3
1938 Female, age 85, left hemisphere 23.5
2613 Female, age 94, left hemisphere 23.0
2764 Male, age 80, right hemisphere 23.0
Hippocampus, CA1
nTPM: 23.9
2527 Male, age 74, both hemispheres 25.4
1873 Female, age 85, both hemispheres 23.7
2045 Male, age 76, both hemispheres 23.6
2749 Male, age 80, left hemisphere 23.5
2082 Female, age 91, right hemisphere 23.4
Hippocampus, CA2
nTPM: 24.7
2437 Female, age 94, left hemisphere 25.7
2249 Male, age 74, both hemispheres 25.5
1963 Male, age 80, left hemisphere 24.9
2113 Female, age 91, right hemisphere 24.3
1892 Male, age 76, both hemispheres 23.9
1940 Female, age 85, left hemisphere 23.6
Hippocampus, CA3
nTPM: 25.6
2436 Male, age 74, both hemispheres 29.2
2861 Female, age 67, both hemispheres 26.3
2137 Male, age 80, left hemisphere 26.0
1867 Male, age 76, both hemispheres 25.2
1891 Female, age 85, both hemispheres 24.0
2620 Female, age 94, left hemisphere 23.1
Parahippocampal cortex
nTPM: 24.6
2018 Male, age 76, both hemispheres 26.2
2250 Female, age 67, right hemisphere 25.9
2693 Female, age 94, both hemispheres 25.5
1990 Female, age 91, right hemisphere 25.0
2245 Female, age 91, both hemispheres 24.8
2622 Female, age 67, right hemisphere 24.7
2532 Female, age 72, left hemisphere 24.4
1933 Female, age 85, both hemispheres 23.8
1850 Male, age 80, both hemispheres 22.8
2692 Male, age 74, both hemispheres 22.7
Perirhinal gyrus
nTPM: 24.5
1841 Female, age 85, right hemisphere 26.1
2521 Female, age 94, right hemisphere 25.5
1794 Male, age 80, right hemisphere 23.9
2848 Male, age 76, right hemisphere 23.6
1847 Female, age 91, left hemisphere 23.4
Subiculum
nTPM: 24.5
2042 Male, age 76, both hemispheres 25.7
2619 Male, age 74, both hemispheres 24.8
2729 Female, age 91, right hemisphere 24.7
1977 Female, age 85, both hemispheres 24.5
1901 Male, age 80, both hemispheres 23.9
2438 Female, age 94, left hemisphere 23.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.4
Samples: 197

Max nTPM: 171.8
Min nTPM: 4.1
Std nTPM: 18.3
Median nTPM: 16.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 171.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 134.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 87.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 86.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 65.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 64.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 61.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 54.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 54.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.1
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 41.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10153-102I9 76 years, female 22.0
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 16.7
Min nTPM: 9.1
Sample A Female 16.4
Sample B Female 16.7
Sample C Male 9.1
Sample D Male 11.1
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.1
Min nTPM: 5.2
Sample A Female 6.9
Sample B Female 7.1
Sample C Male 5.4
Sample D Male 5.2
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.6
Sample A Female 4.9
Sample B Female 3.6
Sample C Male 3.9
Sample D Male 3.7
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 34.8
Min nTPM: 4.6
Sample A Female 5.1
Sample B Female 4.6
Sample C Male 6.6
Sample D Male 34.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 20.8
Min nTPM: 14.4
Sample A Male 20.8
Sample B Male 19.3
Sample C Female 18.0
Sample D Female 14.4
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 40.3
Min nTPM: 24.0
Sample A Male 24.0
Sample B Male 30.4
Sample C Female 40.3
Sample D Female 28.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
70431391 Antisense, RP_050614_02_G03, Mouse strain C57BL/6J (56 days, male) 6.5
71924311 Antisense, RP_050614_02_G03, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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