HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.6 nTPM
HPA:48.6 nTPM
GTEx:46.3 nTPM
FANTOM5:24.8 Scaled Tags Per Million
Pig:16.3 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049059
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.6
Sample id Sample description nTPM
Hippocampus
nTPM: 47.9
2529 Female, age 94, left hemisphere 51.1
2621 Female, age 67, right hemisphere 49.1
2148 Female, age 91, left hemisphere 47.1
1898 Male, age 80, left hemisphere 46.9
1855 Male, age 76, left hemisphere 46.8
1911 Female, age 85, right hemisphere 46.3
Dentate gyrus
nTPM: 46.3
2530 Female, age 94, left hemisphere 52.3
2531 Female, age 67, both hemispheres 48.0
2010 Male, age 76, both hemispheres 45.8
2528 Male, age 74, both hemispheres 45.4
2246 Female, age 85, both hemispheres 44.6
1927 Female, age 91, both hemispheres 41.7
Entorhinal gyrus
nTPM: 48.6
2613 Female, age 94, left hemisphere 55.0
2117 Female, age 91, right hemisphere 49.5
2686 Male, age 75, right hemisphere 49.0
1787 Male, age 76, left hemisphere 48.2
2764 Male, age 80, right hemisphere 45.3
1938 Female, age 85, left hemisphere 44.5
Hippocampus, CA1
nTPM: 45.4
2082 Female, age 91, right hemisphere 49.1
2527 Male, age 74, both hemispheres 46.6
2749 Male, age 80, left hemisphere 44.5
2045 Male, age 76, both hemispheres 43.9
1873 Female, age 85, both hemispheres 43.0
Hippocampus, CA2
nTPM: 46.7
1963 Male, age 80, left hemisphere 50.5
2437 Female, age 94, left hemisphere 49.2
1940 Female, age 85, left hemisphere 46.3
2113 Female, age 91, right hemisphere 46.3
1892 Male, age 76, both hemispheres 44.5
2249 Male, age 74, both hemispheres 43.2
Hippocampus, CA3
nTPM: 45.3
2861 Female, age 67, both hemispheres 52.2
1891 Female, age 85, both hemispheres 46.3
2137 Male, age 80, left hemisphere 46.3
2620 Female, age 94, left hemisphere 43.4
1867 Male, age 76, both hemispheres 42.8
2436 Male, age 74, both hemispheres 40.6
Parahippocampal cortex
nTPM: 44.9
2622 Female, age 67, right hemisphere 46.7
2018 Male, age 76, both hemispheres 46.4
2245 Female, age 91, both hemispheres 46.3
2532 Female, age 72, left hemisphere 46.1
2692 Male, age 74, both hemispheres 46.0
1933 Female, age 85, both hemispheres 44.9
1990 Female, age 91, right hemisphere 44.4
2250 Female, age 67, right hemisphere 43.9
1850 Male, age 80, both hemispheres 42.9
2693 Female, age 94, both hemispheres 41.4
Perirhinal gyrus
nTPM: 43.5
1841 Female, age 85, right hemisphere 43.8
2848 Male, age 76, right hemisphere 43.8
2521 Female, age 94, right hemisphere 43.5
1794 Male, age 80, right hemisphere 43.3
1847 Female, age 91, left hemisphere 43.0
Subiculum
nTPM: 47.2
2438 Female, age 94, left hemisphere 51.8
2042 Male, age 76, both hemispheres 49.4
2729 Female, age 91, right hemisphere 46.3
1977 Female, age 85, both hemispheres 45.8
1901 Male, age 80, both hemispheres 45.0
2619 Male, age 74, both hemispheres 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.3
Samples: 197

Max nTPM: 99.4
Min nTPM: 20.0
Std nTPM: 14.0
Median nTPM: 43.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 99.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 94.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 91.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 90.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 89.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 87.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 83.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 79.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 74.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 74.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.8
FF:10153-102I9 76 years, female 28.7
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 12.4
Sample A Female 19.2
Sample B Female 15.7
Sample C Male 17.9
Sample D Male 12.4
Entorhinal cortex
nTPM: 13.9
Samples: 4

Max nTPM: 15.7
Min nTPM: 12.1
Sample A Female 15.1
Sample B Female 12.1
Sample C Male 15.7
Sample D Male 12.5
Subiculum
nTPM: 13.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.0
Sample A Female 16.4
Sample B Female 12.0
Sample C Male 13.4
Sample D Male 12.4
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.6
Sample A Female 12.8
Sample B Female 11.6
Sample C Male 19.5
Sample D Male 18.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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