COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.6 nTPM
HPA:4.8 nTPM
GTEx:26.6 nTPM
FANTOM5:17.5 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - Antibody stainingi
Antibody HPA053240
Endothelial cells Not detected
Glandular cells Not detected
Peripheral nerve/ganglion Not detected


COLON - HPA RNA-seqi
Average nTPM 4.8
overview
Male, age 54 		Colon sample 67
nTPM: 3.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 6.2
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.7
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 4.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 5.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 3.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 6.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 12.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 26.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 26.6
Samples: 373

Max nTPM: 99.6
Min nTPM: 5.7
Std nTPM: 13.1
Median nTPM: 24.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 99.6
GTEX-1LKK1-2426-SM-DIPES 50-59 years, female 92.7
GTEX-1C6VQ-2626-SM-7IGMQ 50-59 years, male 76.9
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 75.7
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 73.5
GTEX-1H23P-2626-SM-9KNVN 60-69 years, male 69.8
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 68.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 67.4
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 65.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 63.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 57.7
Show allShow less
Colon - Transverse
Average nTPM: 16.0
Samples: 406

Max nTPM: 51.8
Min nTPM: 1.9
Std nTPM: 9.3
Median nTPM: 13.4
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 51.8
GTEX-1NV5F-2226-SM-DTX8O 60-69 years, female 49.4
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 46.7
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 45.7
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 42.3
GTEX-18D9B-2526-SM-718BN 60-69 years, male 42.1
GTEX-1HKZK-2126-SM-A9SL3 40-49 years, male 40.6
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 40.4
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 40.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 40.1
GTEX-16NPV-2626-SM-6M484 50-59 years, female 40.0
Show allShow less

COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.5
FF:10014-101C5 62,83,84 years, mixed 17.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.