COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.6 nTPM
HPA:5.2 nTPM
GTEx:11.6 nTPM
FANTOM5:4.9 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 5.2
overview
Male, age 54 		Colon sample 67
nTPM: 3
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 3.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 3.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 8.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 10.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 4.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 2.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 6.8
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 2.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 3.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 7.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 5.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 11.6
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.6
Samples: 373

Max nTPM: 36.8
Min nTPM: 1.8
Std nTPM: 5.5
Median nTPM: 10.7
GTEX-ZF2S-1826-SM-4WKFF 50-59 years, female 36.8
GTEX-15RIE-2026-SM-7KFRW 60-69 years, male 30.8
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 28.5
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 27.9
GTEX-1RQEC-2626-SM-EVR3Z 60-69 years, male 27.6
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 26.4
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 25.8
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 25.5
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 25.5
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 25.2
GTEX-YFCO-1526-SM-5YYB8 40-49 years, male 24.2
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Colon - Transverse
Average nTPM: 8.3
Samples: 406

Max nTPM: 46.3
Min nTPM: 0.8
Std nTPM: 6.0
Median nTPM: 6.8
GTEX-1R9K5-2126-SM-E8VN1 50-59 years, male 46.3
GTEX-15CHQ-2526-SM-6EU24 60-69 years, male 44.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 32.2
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 31.7
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 25.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 24.7
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 24.0
GTEX-1F75B-2726-SM-7P8QO 50-59 years, male 23.4
GTEX-1IKK5-2726-SM-CNPQ6 60-69 years, male 23.2
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 23.1
GTEX-1EMGI-2726-SM-7P8S4 60-69 years, male 22.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 4.9
FF:10014-101C5 62,83,84 years, mixed 4.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.