COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:43.5 nTPM
HPA:18.3 nTPM
GTEx:43.5 nTPM
FANTOM5:8.5 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043134Antibody HPA050402
Endothelial cells Not detectedLow
Glandular cells MediumMedium
Peripheral nerve/ganglion Not detectedLow



COLON - HPA RNA-seqi
Average nTPM 18.3
overview
Male, age 54 		Colon sample 67
nTPM: 16.6
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 20.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 17.2
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 33.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 21.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 11.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 9.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 18.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 11.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 8.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 12.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 19.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 37.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 43.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 28.4
Samples: 373

Max nTPM: 119.1
Min nTPM: 8.3
Std nTPM: 15.2
Median nTPM: 24.6
GTEX-Y8LW-1126-SM-4VDS4 50-59 years, female 119.1
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 102.0
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 88.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 85.7
GTEX-WYJK-2326-SM-4ONDN 50-59 years, male 79.6
GTEX-V955-1726-SM-4JBHF 60-69 years, male 78.7
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 72.6
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 69.6
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 64.6
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 63.2
GTEX-1IL2U-2526-SM-C1YQV 60-69 years, male 62.0
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Colon - Transverse
Average nTPM: 43.5
Samples: 406

Max nTPM: 156.0
Min nTPM: 9.1
Std nTPM: 21.3
Median nTPM: 40.1
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 156.0
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 144.0
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 142.9
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 112.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 110.3
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 109.4
GTEX-14C39-1926-SM-5ZZW5 40-49 years, male 106.9
GTEX-Q734-1126-SM-48TZY 40-49 years, female 103.6
GTEX-OXRO-0726-SM-E9U4C 60-69 years, female 103.6
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 102.7
GTEX-139TS-1926-SM-5IJFO 60-69 years, male 101.4
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 8.5
FF:10014-101C5 62,83,84 years, mixed 8.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.