COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:16.0 nTPM
HPA:16.0 nTPM
GTEx:10.8 nTPM
FANTOM5:39.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA010718Antibody HPA014730
Endothelial cells Not detectedNot detected
Glandular cells Not detectedLow
Peripheral nerve/ganglion Not detected-




COLON - HPA RNA-seqi
Average nTPM 16.0
overview
Male, age 54 		Colon sample 67
nTPM: 9.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 17.4
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 4.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 3.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 38.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 18.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 13.9
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 16.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 12.5
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 10.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 33.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 11.5
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 16.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 10.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 9.5
Samples: 373

Max nTPM: 70.5
Min nTPM: 1.1
Std nTPM: 6.8
Median nTPM: 7.9
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 70.5
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 63.8
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 38.3
GTEX-1LSVX-2026-SM-E9TJD 60-69 years, male 34.9
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 32.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 31.2
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 29.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 28.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 27.2
GTEX-1I1GP-2826-SM-A9SKZ 50-59 years, male 24.3
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 22.7
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Colon - Transverse
Average nTPM: 10.8
Samples: 406

Max nTPM: 71.7
Min nTPM: 1.9
Std nTPM: 8.5
Median nTPM: 8.2
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 71.7
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 55.7
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 50.8
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 50.2
GTEX-16XZZ-2626-SM-6M47S 60-69 years, male 47.5
GTEX-144GM-1226-SM-5LU52 20-29 years, male 42.8
GTEX-17EVQ-1826-SM-7IGPH 70-79 years, male 40.7
GTEX-1JN1M-2626-SM-CY8I3 60-69 years, female 38.2
GTEX-15G1A-1826-SM-7KUKO 30-39 years, male 35.3
GTEX-1JJ6O-2426-SM-ARU8J 60-69 years, male 35.1
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 34.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 39.1
FF:10014-101C5 62,83,84 years, mixed 39.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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