HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.1 nTPM
HPA:27.1 nTPM
GTEx:21.1 nTPM
FANTOM5:84.1 Scaled Tags Per Million
Pig:33.2 nTPM
Mouse:50.9 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019788
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.1
Sample id Sample description nTPM
Hippocampus
nTPM: 23.7
1855 Male, age 76, left hemisphere 26.0
2621 Female, age 67, right hemisphere 24.4
1911 Female, age 85, right hemisphere 23.7
1898 Male, age 80, left hemisphere 23.6
2529 Female, age 94, left hemisphere 23.1
2148 Female, age 91, left hemisphere 21.5
Dentate gyrus
nTPM: 21.7
1927 Female, age 91, both hemispheres 24.3
2010 Male, age 76, both hemispheres 24.1
2246 Female, age 85, both hemispheres 23.5
2528 Male, age 74, both hemispheres 20.7
2531 Female, age 67, both hemispheres 19.6
2530 Female, age 94, left hemisphere 18.3
Entorhinal gyrus
nTPM: 21.7
1787 Male, age 76, left hemisphere 25.2
2117 Female, age 91, right hemisphere 25.1
1938 Female, age 85, left hemisphere 22.3
2764 Male, age 80, right hemisphere 21.5
2686 Male, age 75, right hemisphere 18.1
2613 Female, age 94, left hemisphere 18.0
Hippocampus, CA1
nTPM: 27.1
2749 Male, age 80, left hemisphere 45.8
1873 Female, age 85, both hemispheres 25.3
2527 Male, age 74, both hemispheres 22.9
2045 Male, age 76, both hemispheres 22.3
2082 Female, age 91, right hemisphere 19.5
Hippocampus, CA2
nTPM: 21.8
1963 Male, age 80, left hemisphere 26.7
1892 Male, age 76, both hemispheres 24.6
2249 Male, age 74, both hemispheres 22.0
2113 Female, age 91, right hemisphere 21.0
1940 Female, age 85, left hemisphere 19.0
2437 Female, age 94, left hemisphere 17.6
Hippocampus, CA3
nTPM: 24.5
2137 Male, age 80, left hemisphere 37.3
1867 Male, age 76, both hemispheres 24.8
1891 Female, age 85, both hemispheres 22.9
2436 Male, age 74, both hemispheres 22.6
2620 Female, age 94, left hemisphere 20.9
2861 Female, age 67, both hemispheres 18.3
Parahippocampal cortex
nTPM: 21.7
2250 Female, age 67, right hemisphere 24.3
2245 Female, age 91, both hemispheres 23.7
2692 Male, age 74, both hemispheres 23.1
1933 Female, age 85, both hemispheres 22.7
1990 Female, age 91, right hemisphere 22.4
1850 Male, age 80, both hemispheres 22.3
2018 Male, age 76, both hemispheres 21.0
2693 Female, age 94, both hemispheres 20.0
2532 Female, age 72, left hemisphere 19.7
2622 Female, age 67, right hemisphere 17.5
Perirhinal gyrus
nTPM: 23.1
2521 Female, age 94, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.5
2848 Male, age 76, right hemisphere 22.4
1841 Female, age 85, right hemisphere 22.2
1794 Male, age 80, right hemisphere 21.9
Subiculum
nTPM: 23.8
1901 Male, age 80, both hemispheres 27.9
2042 Male, age 76, both hemispheres 25.6
1977 Female, age 85, both hemispheres 23.5
2619 Male, age 74, both hemispheres 22.7
2438 Female, age 94, left hemisphere 22.0
2729 Female, age 91, right hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.1
Samples: 197

Max nTPM: 40.0
Min nTPM: 9.4
Std nTPM: 4.9
Median nTPM: 20.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 40.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 35.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 34.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 34.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 33.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 33.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 32.5
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 32.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 30.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 30.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.1
FF:10169-103B7 60 years, female 87.8
FF:10153-102I9 76 years, female 80.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.3
Samples: 4

Max nTPM: 35.9
Min nTPM: 21.7
Sample A Female 35.9
Sample B Female 31.4
Sample C Male 21.7
Sample D Male 28.3
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 37.2
Min nTPM: 25.6
Sample A Female 37.2
Sample B Female 29.5
Sample C Male 27.3
Sample D Male 25.6
Subiculum
nTPM: 33.2
Samples: 4

Max nTPM: 46.0
Min nTPM: 28.1
Sample A Female 46.0
Sample B Female 30.1
Sample C Male 28.4
Sample D Male 28.1
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 30.2
Min nTPM: 21.7
Sample A Female 25.1
Sample B Female 21.7
Sample C Male 27.7
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.9
Samples: 4

Max nTPM: 60.0
Min nTPM: 46.7
Sample A Male 46.7
Sample B Male 48.9
Sample C Female 48.1
Sample D Female 60.0
Hippocampal formation
nTPM: 48.7
Samples: 4

Max nTPM: 55.0
Min nTPM: 43.9
Sample A Male 47.0
Sample B Male 48.8
Sample C Female 55.0
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
70439105 Antisense, RP_050614_03_B09, Mouse strain C57BL/6J (56 days, male) 10.5

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