HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:65.3 nTPM
HPA:65.3 nTPM
GTEx:53.6 nTPM
FANTOM5:89.0 Scaled Tags Per Million
Pig:44.3 nTPM
Mouse:41.5 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008455Antibody HPA031125Antibody CAB002781Antibody CAB068195
Glial cells Not detectedMedium-Not detected
Neuronal cells Not detectedMediumNot detectedNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.3
Sample id Sample description nTPM
Hippocampus
nTPM: 65.3
2529 Female, age 94, left hemisphere 73.3
1855 Male, age 76, left hemisphere 65.1
2148 Female, age 91, left hemisphere 65.1
1898 Male, age 80, left hemisphere 64.6
2621 Female, age 67, right hemisphere 62.9
1911 Female, age 85, right hemisphere 60.7
Dentate gyrus
nTPM: 62.8
2530 Female, age 94, left hemisphere 67.7
2010 Male, age 76, both hemispheres 65.6
2528 Male, age 74, both hemispheres 62.9
2531 Female, age 67, both hemispheres 61.4
2246 Female, age 85, both hemispheres 60.9
1927 Female, age 91, both hemispheres 58.4
Entorhinal gyrus
nTPM: 63.4
2117 Female, age 91, right hemisphere 71.4
2686 Male, age 75, right hemisphere 66.5
1787 Male, age 76, left hemisphere 66.2
2764 Male, age 80, right hemisphere 61.1
1938 Female, age 85, left hemisphere 60.8
2613 Female, age 94, left hemisphere 54.5
Hippocampus, CA1
nTPM: 64.2
2045 Male, age 76, both hemispheres 71.8
2527 Male, age 74, both hemispheres 66.6
2082 Female, age 91, right hemisphere 62.2
1873 Female, age 85, both hemispheres 61.0
2749 Male, age 80, left hemisphere 59.3
Hippocampus, CA2
nTPM: 64.6
2249 Male, age 74, both hemispheres 67.6
1892 Male, age 76, both hemispheres 65.9
2113 Female, age 91, right hemisphere 65.8
2437 Female, age 94, left hemisphere 63.9
1940 Female, age 85, left hemisphere 63.0
1963 Male, age 80, left hemisphere 61.1
Hippocampus, CA3
nTPM: 64.6
1867 Male, age 76, both hemispheres 77.0
2861 Female, age 67, both hemispheres 66.3
2436 Male, age 74, both hemispheres 65.4
1891 Female, age 85, both hemispheres 61.2
2620 Female, age 94, left hemisphere 61.1
2137 Male, age 80, left hemisphere 56.9
Parahippocampal cortex
nTPM: 62.3
2250 Female, age 67, right hemisphere 69.9
2018 Male, age 76, both hemispheres 69.5
2692 Male, age 74, both hemispheres 63.5
1990 Female, age 91, right hemisphere 62.6
2245 Female, age 91, both hemispheres 62.5
2622 Female, age 67, right hemisphere 61.8
1933 Female, age 85, both hemispheres 61.3
2532 Female, age 72, left hemisphere 59.3
1850 Male, age 80, both hemispheres 57.6
2693 Female, age 94, both hemispheres 55.0
Perirhinal gyrus
nTPM: 59.7
1847 Female, age 91, left hemisphere 61.6
1794 Male, age 80, right hemisphere 60.4
2521 Female, age 94, right hemisphere 59.1
1841 Female, age 85, right hemisphere 58.8
2848 Male, age 76, right hemisphere 58.7
Subiculum
nTPM: 64.1
2042 Male, age 76, both hemispheres 73.2
2619 Male, age 74, both hemispheres 65.0
1977 Female, age 85, both hemispheres 63.1
2729 Female, age 91, right hemisphere 62.9
1901 Male, age 80, both hemispheres 61.7
2438 Female, age 94, left hemisphere 58.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.6
Samples: 197

Max nTPM: 214.2
Min nTPM: 17.8
Std nTPM: 30.0
Median nTPM: 45.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 214.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 187.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 171.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 144.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 136.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 120.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 120.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 116.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 110.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 109.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 105.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.0
FF:10153-102I9 76 years, female 102.7
FF:10169-103B7 60 years, female 75.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 53.9
Min nTPM: 35.0
Sample A Female 53.9
Sample B Female 39.6
Sample C Male 48.9
Sample D Male 35.0
Entorhinal cortex
nTPM: 42.8
Samples: 4

Max nTPM: 49.1
Min nTPM: 35.3
Sample A Female 41.0
Sample B Female 45.9
Sample C Male 49.1
Sample D Male 35.3
Subiculum
nTPM: 40.4
Samples: 4

Max nTPM: 46.8
Min nTPM: 37.1
Sample A Female 46.8
Sample B Female 37.1
Sample C Male 38.7
Sample D Male 39.0
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 48.1
Min nTPM: 33.8
Sample A Female 33.8
Sample B Female 34.1
Sample C Male 48.1
Sample D Male 44.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 45.2
Min nTPM: 35.7
Sample A Male 40.7
Sample B Male 45.2
Sample C Female 35.7
Sample D Female 38.2
Hippocampal formation
nTPM: 41.5
Samples: 4

Max nTPM: 44.0
Min nTPM: 39.7
Sample A Male 44.0
Sample B Male 41.9
Sample C Female 40.4
Sample D Female 39.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
112647104 Antisense, RP_110421_01_A10, Mouse strain C57BL/6J (56 days, male) 2.1
68203510 Antisense, RP_041208_01_E06, Mouse strain C57BL/6J (56 days, male) 1.2

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