HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.8 nTPM
HPA:32.8 nTPM
GTEx:30.0 nTPM
FANTOM5:72.7 Scaled Tags Per Million
Pig:4.0 nTPM
Mouse:73.9 nTPM
Allen mouse:17.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063133Antibody HPA067561Antibody CAB021114
Glial cells HighMediumLow
Neuronal cells MediumMediumNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
1898 Male, age 80, left hemisphere 36.3
2529 Female, age 94, left hemisphere 35.4
1911 Female, age 85, right hemisphere 33.6
1855 Male, age 76, left hemisphere 33.5
2148 Female, age 91, left hemisphere 30.4
2621 Female, age 67, right hemisphere 27.6
Dentate gyrus
nTPM: 30.5
2010 Male, age 76, both hemispheres 33.7
2530 Female, age 94, left hemisphere 32.1
2246 Female, age 85, both hemispheres 31.5
2528 Male, age 74, both hemispheres 30.1
1927 Female, age 91, both hemispheres 29.0
2531 Female, age 67, both hemispheres 26.7
Entorhinal gyrus
nTPM: 30.5
2686 Male, age 75, right hemisphere 34.8
1938 Female, age 85, left hemisphere 33.5
2117 Female, age 91, right hemisphere 31.5
1787 Male, age 76, left hemisphere 30.9
2764 Male, age 80, right hemisphere 26.2
2613 Female, age 94, left hemisphere 26.0
Hippocampus, CA1
nTPM: 32.0
1873 Female, age 85, both hemispheres 35.3
2527 Male, age 74, both hemispheres 32.7
2749 Male, age 80, left hemisphere 32.1
2045 Male, age 76, both hemispheres 30.4
2082 Female, age 91, right hemisphere 29.6
Hippocampus, CA2
nTPM: 30.7
2113 Female, age 91, right hemisphere 32.3
2249 Male, age 74, both hemispheres 31.8
1892 Male, age 76, both hemispheres 31.4
2437 Female, age 94, left hemisphere 30.2
1940 Female, age 85, left hemisphere 29.6
1963 Male, age 80, left hemisphere 28.8
Hippocampus, CA3
nTPM: 28.8
2137 Male, age 80, left hemisphere 32.3
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 31.3
2436 Male, age 74, both hemispheres 26.6
2861 Female, age 67, both hemispheres 26.0
2620 Female, age 94, left hemisphere 24.5
Parahippocampal cortex
nTPM: 30.9
2250 Female, age 67, right hemisphere 35.1
2245 Female, age 91, both hemispheres 32.6
1933 Female, age 85, both hemispheres 32.3
2018 Male, age 76, both hemispheres 32.1
1850 Male, age 80, both hemispheres 31.2
2622 Female, age 67, right hemisphere 29.8
2692 Male, age 74, both hemispheres 29.6
1990 Female, age 91, right hemisphere 29.2
2532 Female, age 72, left hemisphere 28.4
2693 Female, age 94, both hemispheres 28.3
Perirhinal gyrus
nTPM: 30.2
1841 Female, age 85, right hemisphere 32.6
2848 Male, age 76, right hemisphere 30.4
1847 Female, age 91, left hemisphere 29.7
2521 Female, age 94, right hemisphere 29.2
1794 Male, age 80, right hemisphere 29.0
Subiculum
nTPM: 31.1
2438 Female, age 94, left hemisphere 33.9
2729 Female, age 91, right hemisphere 32.9
2042 Male, age 76, both hemispheres 31.2
1901 Male, age 80, both hemispheres 30.1
1977 Female, age 85, both hemispheres 30.0
2619 Male, age 74, both hemispheres 28.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.0
Samples: 197

Max nTPM: 58.0
Min nTPM: 15.2
Std nTPM: 7.5
Median nTPM: 29.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 58.0
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 57.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 51.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 50.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 48.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 48.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 48.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 45.4
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 45.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 44.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.7
FF:10153-102I9 76 years, female 78.4
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1.9
Samples: 4

Max nTPM: 2.4
Min nTPM: 0.8
Sample A Female 0.8
Sample B Female 2.2
Sample C Male 2.4
Sample D Male 2.1
Entorhinal cortex
nTPM: 3.6
Samples: 4

Max nTPM: 5.1
Min nTPM: 2.8
Sample A Female 2.9
Sample B Female 2.8
Sample C Male 3.7
Sample D Male 5.1
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 5.1
Min nTPM: 1.8
Sample A Female 1.8
Sample B Female 4.2
Sample C Male 4.9
Sample D Male 5.1
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 5.6
Min nTPM: 2.0
Sample A Female 2.8
Sample B Female 5.6
Sample C Male 2.0
Sample D Male 2.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.7
Samples: 4

Max nTPM: 79.1
Min nTPM: 68.9
Sample A Male 79.1
Sample B Male 74.9
Sample C Female 68.9
Sample D Female 71.8
Hippocampal formation
nTPM: 73.9
Samples: 4

Max nTPM: 76.1
Min nTPM: 71.4
Sample A Male 74.4
Sample B Male 73.8
Sample C Female 76.1
Sample D Female 71.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.9
71610840 Antisense, RP_050927_01_H10, Mouse strain C57BL/6J (56 days, male) 17.9

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