COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:31.1 nTPM
HPA:31.1 nTPM
GTEx:18.1 nTPM
FANTOM5:67.1 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 31.1
overview
Male, age 54 		Colon sample 67
nTPM: 42.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 32.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 31.6
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 28.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 17.9
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 26.5
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 38.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 30.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 21.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 40.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 41
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 31
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 22.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 18.1
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 12.0
Samples: 373

Max nTPM: 32.1
Min nTPM: 4.9
Std nTPM: 3.6
Median nTPM: 11.3
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 32.1
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 27.4
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 27.0
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 25.2
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 23.9
GTEX-14E1K-1626-SM-664MO 50-59 years, male 23.2
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 23.0
GTEX-13113-1426-SM-5EGHU 60-69 years, female 22.0
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 20.9
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 20.5
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 20.4
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Colon - Transverse
Average nTPM: 18.1
Samples: 406

Max nTPM: 53.9
Min nTPM: 4.8
Std nTPM: 8.3
Median nTPM: 16.1
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 53.9
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 49.5
GTEX-1F5PK-1926-SM-7MXT7 50-59 years, male 43.6
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 42.8
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 41.1
GTEX-1RAZR-1926-SM-E6CRF 40-49 years, male 38.7
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 37.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 37.3
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 36.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 36.0
GTEX-15RIF-1326-SM-6LPKO 20-29 years, male 35.8
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 67.1
FF:10014-101C5 62,83,84 years, mixed 67.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.