HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:15.8 nTPM
HPA:15.8 nTPM
GTEx:13.8 nTPM
FANTOM5:79.5 Scaled Tags Per Million
Pig:18.0 nTPM
Mouse:6.6 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011222
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 15.8
1898 Male, age 80, left hemisphere 19.2
1855 Male, age 76, left hemisphere 16.3
2529 Female, age 94, left hemisphere 15.8
2621 Female, age 67, right hemisphere 15.6
2148 Female, age 91, left hemisphere 14.8
1911 Female, age 85, right hemisphere 13.0
Dentate gyrus
nTPM: 13.9
2010 Male, age 76, both hemispheres 18.3
2530 Female, age 94, left hemisphere 13.4
2246 Female, age 85, both hemispheres 13.3
2528 Male, age 74, both hemispheres 13.3
1927 Female, age 91, both hemispheres 13.2
2531 Female, age 67, both hemispheres 11.9
Entorhinal gyrus
nTPM: 13.1
2117 Female, age 91, right hemisphere 15.7
2764 Male, age 80, right hemisphere 13.4
1787 Male, age 76, left hemisphere 13.0
1938 Female, age 85, left hemisphere 13.0
2686 Male, age 75, right hemisphere 12.9
2613 Female, age 94, left hemisphere 10.7
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 16.7
1873 Female, age 85, both hemispheres 16.2
2527 Male, age 74, both hemispheres 15.3
2082 Female, age 91, right hemisphere 13.9
2045 Male, age 76, both hemispheres 12.4
Hippocampus, CA2
nTPM: 14.1
1963 Male, age 80, left hemisphere 16.7
1892 Male, age 76, both hemispheres 15.1
2113 Female, age 91, right hemisphere 14.0
2249 Male, age 74, both hemispheres 13.7
2437 Female, age 94, left hemisphere 13.0
1940 Female, age 85, left hemisphere 12.5
Hippocampus, CA3
nTPM: 13.9
2861 Female, age 67, both hemispheres 16.4
2137 Male, age 80, left hemisphere 16.2
1867 Male, age 76, both hemispheres 14.1
2436 Male, age 74, both hemispheres 13.8
1891 Female, age 85, both hemispheres 12.3
2620 Female, age 94, left hemisphere 10.4
Parahippocampal cortex
nTPM: 13.3
1933 Female, age 85, both hemispheres 13.9
2245 Female, age 91, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.7
2622 Female, age 67, right hemisphere 13.7
2532 Female, age 72, left hemisphere 13.5
2692 Male, age 74, both hemispheres 13.5
1850 Male, age 80, both hemispheres 13.2
2018 Male, age 76, both hemispheres 12.9
2693 Female, age 94, both hemispheres 12.7
1990 Female, age 91, right hemisphere 12.1
Perirhinal gyrus
nTPM: 12.7
1847 Female, age 91, left hemisphere 14.0
2521 Female, age 94, right hemisphere 13.7
1794 Male, age 80, right hemisphere 13.2
1841 Female, age 85, right hemisphere 11.8
2848 Male, age 76, right hemisphere 10.9
Subiculum
nTPM: 13.5
2729 Female, age 91, right hemisphere 14.2
1901 Male, age 80, both hemispheres 13.9
2619 Male, age 74, both hemispheres 13.7
1977 Female, age 85, both hemispheres 13.4
2042 Male, age 76, both hemispheres 13.3
2438 Female, age 94, left hemisphere 12.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 37.8
Min nTPM: 5.5
Std nTPM: 4.6
Median nTPM: 13.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 37.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 28.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 27.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 25.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 25.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 24.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 23.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 22.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 22.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.5
FF:10169-103B7 60 years, female 99.4
FF:10153-102I9 76 years, female 59.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 19.7
Min nTPM: 13.9
Sample A Female 19.7
Sample B Female 18.8
Sample C Male 17.6
Sample D Male 13.9
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.5
Min nTPM: 14.0
Sample A Female 16.5
Sample B Female 16.0
Sample C Male 15.9
Sample D Male 14.0
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.4
Sample A Female 18.2
Sample B Female 14.5
Sample C Male 16.4
Sample D Male 13.4
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 22.0
Min nTPM: 14.3
Sample A Female 18.2
Sample B Female 14.3
Sample C Male 22.0
Sample D Male 17.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.6
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.0
Sample A Male 8.7
Sample B Male 7.0
Sample C Female 5.0
Sample D Female 5.8
Hippocampal formation
nTPM: 5.1
Samples: 4

Max nTPM: 7.0
Min nTPM: 3.8
Sample A Male 3.9
Sample B Male 5.7
Sample C Female 3.8
Sample D Female 7.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
68911014 Antisense, RP_050203_02_F01, Mouse strain C57BL/6J (56 days, male) 2.2

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