HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:221.3 nTPM
HPA:221.3 nTPM
GTEx:115.2 nTPM
FANTOM5:193.5 Scaled Tags Per Million
Pig:65.4 nTPM
Mouse:46.4 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020593Antibody HPA048847
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 221.3
Sample id Sample description nTPM
Hippocampus
nTPM: 221.3
1898 Male, age 80, left hemisphere 228.8
2529 Female, age 94, left hemisphere 228.3
1855 Male, age 76, left hemisphere 226.3
1911 Female, age 85, right hemisphere 219.2
2148 Female, age 91, left hemisphere 218.1
2621 Female, age 67, right hemisphere 207.0
Dentate gyrus
nTPM: 207.6
2528 Male, age 74, both hemispheres 217.8
2246 Female, age 85, both hemispheres 216.2
2530 Female, age 94, left hemisphere 210.1
2010 Male, age 76, both hemispheres 209.9
1927 Female, age 91, both hemispheres 202.8
2531 Female, age 67, both hemispheres 188.6
Entorhinal gyrus
nTPM: 198.9
2117 Female, age 91, right hemisphere 222.7
1938 Female, age 85, left hemisphere 199.1
2764 Male, age 80, right hemisphere 198.9
2686 Male, age 75, right hemisphere 192.6
1787 Male, age 76, left hemisphere 190.7
2613 Female, age 94, left hemisphere 189.4
Hippocampus, CA1
nTPM: 217.9
2527 Male, age 74, both hemispheres 234.9
1873 Female, age 85, both hemispheres 226.0
2082 Female, age 91, right hemisphere 223.0
2749 Male, age 80, left hemisphere 220.4
2045 Male, age 76, both hemispheres 185.4
Hippocampus, CA2
nTPM: 217.4
2249 Male, age 74, both hemispheres 246.2
2113 Female, age 91, right hemisphere 229.9
1963 Male, age 80, left hemisphere 215.5
1940 Female, age 85, left hemisphere 205.5
2437 Female, age 94, left hemisphere 203.9
1892 Male, age 76, both hemispheres 203.6
Hippocampus, CA3
nTPM: 212.6
2436 Male, age 74, both hemispheres 258.3
1891 Female, age 85, both hemispheres 213.7
2137 Male, age 80, left hemisphere 206.8
2620 Female, age 94, left hemisphere 199.8
1867 Male, age 76, both hemispheres 199.7
2861 Female, age 67, both hemispheres 197.2
Parahippocampal cortex
nTPM: 201.1
2692 Male, age 74, both hemispheres 214.0
2245 Female, age 91, both hemispheres 211.6
2622 Female, age 67, right hemisphere 207.2
2250 Female, age 67, right hemisphere 204.8
1990 Female, age 91, right hemisphere 204.6
1933 Female, age 85, both hemispheres 204.1
2532 Female, age 72, left hemisphere 195.3
1850 Male, age 80, both hemispheres 191.7
2693 Female, age 94, both hemispheres 188.9
2018 Male, age 76, both hemispheres 188.4
Perirhinal gyrus
nTPM: 193.8
1847 Female, age 91, left hemisphere 206.0
1794 Male, age 80, right hemisphere 193.5
2521 Female, age 94, right hemisphere 192.7
1841 Female, age 85, right hemisphere 191.7
2848 Male, age 76, right hemisphere 184.9
Subiculum
nTPM: 214.4
2729 Female, age 91, right hemisphere 222.9
2619 Male, age 74, both hemispheres 218.7
2042 Male, age 76, both hemispheres 217.9
1901 Male, age 80, both hemispheres 215.8
2438 Female, age 94, left hemisphere 210.1
1977 Female, age 85, both hemispheres 200.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.2
Samples: 197

Max nTPM: 333.6
Min nTPM: 43.1
Std nTPM: 41.3
Median nTPM: 110.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 333.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 249.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 249.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 238.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 228.7
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 217.6
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 210.2
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 198.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 192.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 187.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 186.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 193.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.5
FF:10169-103B7 60 years, female 195.6
FF:10153-102I9 76 years, female 191.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 63.0
Samples: 4

Max nTPM: 76.7
Min nTPM: 40.1
Sample A Female 69.6
Sample B Female 76.7
Sample C Male 65.6
Sample D Male 40.1
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 30.9
Min nTPM: 21.2
Sample A Female 21.2
Sample B Female 30.9
Sample C Male 28.4
Sample D Male 21.3
Subiculum
nTPM: 46.0
Samples: 4

Max nTPM: 63.2
Min nTPM: 33.0
Sample A Female 36.4
Sample B Female 63.2
Sample C Male 33.0
Sample D Male 51.4
Ventral hippocampus
nTPM: 65.4
Samples: 4

Max nTPM: 70.5
Min nTPM: 59.5
Sample A Female 59.5
Sample B Female 62.4
Sample C Male 70.5
Sample D Male 69.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 30.2
Min nTPM: 23.5
Sample A Male 27.1
Sample B Male 23.5
Sample C Female 30.2
Sample D Female 27.3
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 55.8
Min nTPM: 35.7
Sample A Male 35.7
Sample B Male 39.2
Sample C Female 55.1
Sample D Female 55.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68498247 Antisense, RP_050113_01_E12, Mouse strain C57BL/6J (56 days, male) 1.6

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