HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:7.6 nTPM
HPA:7.6 nTPM
GTEx:15.0 nTPM
FANTOM5:42.8 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:22.8 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053419Antibody HPA054132
Glial cells LowNot detected
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.6
Sample id Sample description nTPM
Hippocampus
nTPM: 2.7
2621 Female, age 67, right hemisphere 9.7
2148 Female, age 91, left hemisphere 6.6
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 5.7
2531 Female, age 67, both hemispheres 21.8
1927 Female, age 91, both hemispheres 12.4
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 0.3
2686 Male, age 75, right hemisphere 2.0
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 3.5
2045 Male, age 76, both hemispheres 8.2
2749 Male, age 80, left hemisphere 7.9
2082 Female, age 91, right hemisphere 1.2
1873 Female, age 85, both hemispheres 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 0.8
1963 Male, age 80, left hemisphere 2.8
1940 Female, age 85, left hemisphere 2.1
2113 Female, age 91, right hemisphere 0.4
1892 Male, age 76, both hemispheres 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 7.6
2861 Female, age 67, both hemispheres 21.5
2620 Female, age 94, left hemisphere 18.6
2137 Male, age 80, left hemisphere 5.8
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 5.1
2622 Female, age 67, right hemisphere 23.5
2693 Female, age 94, both hemispheres 19.9
2245 Female, age 91, both hemispheres 8.1
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2532 Female, age 72, left hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 4.4
2521 Female, age 94, right hemisphere 21.5
1841 Female, age 85, right hemisphere 0.6
1847 Female, age 91, left hemisphere 0.2
1794 Male, age 80, right hemisphere 0.0
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.1
2729 Female, age 91, right hemisphere 0.7
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 55.7
Min nTPM: 1.1
Std nTPM: 10.1
Median nTPM: 12.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 45.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 41.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 40.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 40.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 39.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 37.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 37.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 36.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 36.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.8
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.9
Sample A Female 16.8
Sample B Female 17.7
Sample C Male 12.9
Sample D Male 20.2
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 22.4
Sample A Female 25.0
Sample B Female 22.9
Sample C Male 22.4
Sample D Male 22.8
Subiculum
nTPM: 18.6
Samples: 4

Max nTPM: 21.9
Min nTPM: 14.4
Sample A Female 21.3
Sample B Female 16.6
Sample C Male 21.9
Sample D Male 14.4
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 27.4
Min nTPM: 17.1
Sample A Female 20.5
Sample B Female 18.4
Sample C Male 27.4
Sample D Male 17.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 20.0
Min nTPM: 15.5
Sample A Male 17.1
Sample B Male 15.5
Sample C Female 20.0
Sample D Female 18.1
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.9
Sample A Male 19.9
Sample B Male 23.8
Sample C Female 23.2
Sample D Female 24.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
69817187 Antisense, RP_050510_02_G09, Mouse strain C57BL/6J (56 days, male) 4.0

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