COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:72.2 nTPM
HPA:11.7 nTPM
GTEx:72.2 nTPM
FANTOM5:78.4 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA056000Antibody CAB011521
Endothelial cells Not detectedMedium
Glandular cells Not detectedMedium
Peripheral nerve/ganglion LowLow





COLON - HPA RNA-seqi
Average nTPM 11.7
overview
Male, age 54 		Colon sample 67
nTPM: 6.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 8.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 1.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 8.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 13.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 28.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 9.2
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 22.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 4.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 10.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 13.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 17.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 72.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 72.2
Samples: 373

Max nTPM: 155.2
Min nTPM: 6.2
Std nTPM: 23.5
Median nTPM: 72.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 155.2
GTEX-1LB8K-2526-SM-DIPEQ 50-59 years, male 139.7
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 132.3
GTEX-1J8JJ-2426-SM-D4P4A 60-69 years, female 125.4
GTEX-1GPI7-1926-SM-9KNUH 20-29 years, male 123.4
GTEX-1EU9M-2726-SM-7P8QD 60-69 years, male 122.6
GTEX-16XZZ-2726-SM-7EWDO 60-69 years, male 120.6
GTEX-11ZTS-1526-SM-5N9G7 60-69 years, female 120.5
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 120.4
GTEX-X4EO-2726-SM-4E3HS 60-69 years, female 118.1
GTEX-1GN73-2726-SM-9WYUB 60-69 years, male 117.7
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Colon - Transverse
Average nTPM: 35.0
Samples: 406

Max nTPM: 154.5
Min nTPM: 2.5
Std nTPM: 28.9
Median nTPM: 27.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 154.5
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 133.2
GTEX-18A7A-2226-SM-7LT8K 50-59 years, female 111.5
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 111.5
GTEX-1AYD5-1726-SM-7RHFW 50-59 years, male 111.4
GTEX-1GMR2-1726-SM-9JGI2 50-59 years, male 109.9
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 109.3
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 108.3
GTEX-18D9B-2526-SM-718BN 60-69 years, male 106.7
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 106.4
GTEX-1CB4F-2026-SM-79OLU 60-69 years, male 102.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 78.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 78.4
FF:10014-101C5 62,83,84 years, mixed 78.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.