HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.6 nTPM
HPA:22.6 nTPM
GTEx:22.0 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:24.2 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034870Antibody HPA040989
Glial cells Not detectedNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.6
Sample id Sample description nTPM
Hippocampus
nTPM: 20.3
1898 Male, age 80, left hemisphere 22.4
2148 Female, age 91, left hemisphere 21.5
2621 Female, age 67, right hemisphere 21.2
1855 Male, age 76, left hemisphere 20.4
2529 Female, age 94, left hemisphere 19.9
1911 Female, age 85, right hemisphere 16.4
Dentate gyrus
nTPM: 20.5
2530 Female, age 94, left hemisphere 22.6
2010 Male, age 76, both hemispheres 21.3
1927 Female, age 91, both hemispheres 20.5
2528 Male, age 74, both hemispheres 20.5
2531 Female, age 67, both hemispheres 19.4
2246 Female, age 85, both hemispheres 19.1
Entorhinal gyrus
nTPM: 19.1
2764 Male, age 80, right hemisphere 21.6
2613 Female, age 94, left hemisphere 20.4
1787 Male, age 76, left hemisphere 19.9
1938 Female, age 85, left hemisphere 18.5
2117 Female, age 91, right hemisphere 18.3
2686 Male, age 75, right hemisphere 16.2
Hippocampus, CA1
nTPM: 22.6
2749 Male, age 80, left hemisphere 34.8
2527 Male, age 74, both hemispheres 21.7
1873 Female, age 85, both hemispheres 20.7
2082 Female, age 91, right hemisphere 18.9
2045 Male, age 76, both hemispheres 16.7
Hippocampus, CA2
nTPM: 20.0
1963 Male, age 80, left hemisphere 24.6
1892 Male, age 76, both hemispheres 20.7
2249 Male, age 74, both hemispheres 20.5
2437 Female, age 94, left hemisphere 19.0
2113 Female, age 91, right hemisphere 18.7
1940 Female, age 85, left hemisphere 16.7
Hippocampus, CA3
nTPM: 21.3
2137 Male, age 80, left hemisphere 28.0
2861 Female, age 67, both hemispheres 23.0
2620 Female, age 94, left hemisphere 21.8
2436 Male, age 74, both hemispheres 20.8
1867 Male, age 76, both hemispheres 18.0
1891 Female, age 85, both hemispheres 16.1
Parahippocampal cortex
nTPM: 18.7
2245 Female, age 91, both hemispheres 21.2
2250 Female, age 67, right hemisphere 19.4
1850 Male, age 80, both hemispheres 18.7
1990 Female, age 91, right hemisphere 18.5
2622 Female, age 67, right hemisphere 18.5
2018 Male, age 76, both hemispheres 18.3
2532 Female, age 72, left hemisphere 18.3
2693 Female, age 94, both hemispheres 18.2
1933 Female, age 85, both hemispheres 18.0
2692 Male, age 74, both hemispheres 18.0
Perirhinal gyrus
nTPM: 20.6
1794 Male, age 80, right hemisphere 22.6
2521 Female, age 94, right hemisphere 22.3
1847 Female, age 91, left hemisphere 21.1
1841 Female, age 85, right hemisphere 19.2
2848 Male, age 76, right hemisphere 17.8
Subiculum
nTPM: 17.5
1901 Male, age 80, both hemispheres 19.0
2619 Male, age 74, both hemispheres 18.2
1977 Female, age 85, both hemispheres 17.9
2729 Female, age 91, right hemisphere 17.8
2438 Female, age 94, left hemisphere 17.2
2042 Male, age 76, both hemispheres 14.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.0
Samples: 197

Max nTPM: 44.5
Min nTPM: 9.4
Std nTPM: 7.2
Median nTPM: 20.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 41.4
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 40.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 39.8
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 39.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 39.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 38.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 37.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 36.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.6
FF:10169-103B7 60 years, female 25.1
FF:10153-102I9 76 years, female 22.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 15.5
Min nTPM: 9.9
Sample A Female 15.5
Sample B Female 12.6
Sample C Male 9.9
Sample D Male 11.0
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 21.7
Min nTPM: 14.8
Sample A Female 21.7
Sample B Female 16.0
Sample C Male 18.9
Sample D Male 14.8
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 20.0
Min nTPM: 15.2
Sample A Female 20.0
Sample B Female 15.2
Sample C Male 16.6
Sample D Male 16.2
Ventral hippocampus
nTPM: 13.0
Samples: 4

Max nTPM: 16.5
Min nTPM: 8.6
Sample A Female 14.7
Sample B Female 8.6
Sample C Male 16.5
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.6
Sample A Male 18.6
Sample B Male 22.3
Sample C Female 21.0
Sample D Female 23.2
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 25.2
Min nTPM: 23.3
Sample A Male 24.1
Sample B Male 24.3
Sample C Female 23.3
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
74658171 Antisense, RP_060220_02_C12, Mouse strain C57BL/6J (56 days, male) 2.0
67881764 Antisense, RP_040920_02_G02, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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