HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.1 nTPM
HPA:11.1 nTPM
GTEx:10.3 nTPM
FANTOM5:38.1 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:7.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037499
Glial cells Not detected
Neuronal cells Medium

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.8
1911 Female, age 85, right hemisphere 11.7
1855 Male, age 76, left hemisphere 11.5
2148 Female, age 91, left hemisphere 11.5
1898 Male, age 80, left hemisphere 10.3
2529 Female, age 94, left hemisphere 9.9
2621 Female, age 67, right hemisphere 9.7
Dentate gyrus
nTPM: 10.6
2530 Female, age 94, left hemisphere 11.2
2246 Female, age 85, both hemispheres 11.1
1927 Female, age 91, both hemispheres 11.0
2528 Male, age 74, both hemispheres 11.0
2010 Male, age 76, both hemispheres 9.7
2531 Female, age 67, both hemispheres 9.4
Entorhinal gyrus
nTPM: 10.2
2117 Female, age 91, right hemisphere 11.3
1938 Female, age 85, left hemisphere 10.8
2613 Female, age 94, left hemisphere 10.5
2686 Male, age 75, right hemisphere 10.0
2764 Male, age 80, right hemisphere 9.6
1787 Male, age 76, left hemisphere 9.1
Hippocampus, CA1
nTPM: 10.9
1873 Female, age 85, both hemispheres 12.0
2749 Male, age 80, left hemisphere 11.7
2082 Female, age 91, right hemisphere 10.9
2527 Male, age 74, both hemispheres 10.9
2045 Male, age 76, both hemispheres 9.1
Hippocampus, CA2
nTPM: 10.6
1892 Male, age 76, both hemispheres 10.9
2437 Female, age 94, left hemisphere 10.8
1963 Male, age 80, left hemisphere 10.7
2113 Female, age 91, right hemisphere 10.6
2249 Male, age 74, both hemispheres 10.6
1940 Female, age 85, left hemisphere 10.0
Hippocampus, CA3
nTPM: 10.5
1891 Female, age 85, both hemispheres 12.3
2137 Male, age 80, left hemisphere 11.4
2436 Male, age 74, both hemispheres 10.5
2620 Female, age 94, left hemisphere 10.4
1867 Male, age 76, both hemispheres 9.3
2861 Female, age 67, both hemispheres 9.0
Parahippocampal cortex
nTPM: 11.1
2692 Male, age 74, both hemispheres 13.9
2693 Female, age 94, both hemispheres 12.0
2532 Female, age 72, left hemisphere 11.5
1850 Male, age 80, both hemispheres 11.2
2250 Female, age 67, right hemisphere 11.1
1990 Female, age 91, right hemisphere 11.0
2245 Female, age 91, both hemispheres 10.7
1933 Female, age 85, both hemispheres 10.5
2622 Female, age 67, right hemisphere 9.9
2018 Male, age 76, both hemispheres 9.3
Perirhinal gyrus
nTPM: 10.3
2848 Male, age 76, right hemisphere 10.9
1841 Female, age 85, right hemisphere 10.6
2521 Female, age 94, right hemisphere 10.3
1847 Female, age 91, left hemisphere 10.0
1794 Male, age 80, right hemisphere 9.9
Subiculum
nTPM: 10.7
1901 Male, age 80, both hemispheres 11.5
2729 Female, age 91, right hemisphere 11.3
2619 Male, age 74, both hemispheres 11.0
1977 Female, age 85, both hemispheres 10.6
2042 Male, age 76, both hemispheres 10.0
2438 Female, age 94, left hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.3
Samples: 197

Max nTPM: 16.0
Min nTPM: 6.0
Std nTPM: 1.7
Median nTPM: 10.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 16.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 15.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 14.5
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 13.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 13.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 13.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 13.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 13.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 13.1
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 13.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.1
FF:10153-102I9 76 years, female 38.6
FF:10169-103B7 60 years, female 37.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.7
Sample A Female 18.6
Sample B Female 13.7
Sample C Male 16.5
Sample D Male 14.3
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.2
Sample A Female 14.5
Sample B Female 15.8
Sample C Male 15.1
Sample D Male 12.2
Subiculum
nTPM: 14.9
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.0
Sample A Female 17.1
Sample B Female 13.0
Sample C Male 15.0
Sample D Male 14.6
Ventral hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 15.7
Min nTPM: 12.0
Sample A Female 13.7
Sample B Female 12.0
Sample C Male 13.7
Sample D Male 15.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 11.1
Min nTPM: 4.8
Sample A Male 11.1
Sample B Male 6.4
Sample C Female 6.9
Sample D Female 4.8
Hippocampal formation
nTPM: 6.9
Samples: 4

Max nTPM: 8.0
Min nTPM: 5.9
Sample A Male 5.9
Sample B Male 8.0
Sample C Female 6.8
Sample D Female 6.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69528118 Antisense, RP_050421_03_B07, Mouse strain C57BL/6J (56 days, male) 0.1

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