HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:105.7 nTPM
HPA:105.7 nTPM
GTEx:120.4 nTPM
FANTOM5:80.6 Scaled Tags Per Million
Pig:42.9 nTPM
Mouse:46.0 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044171Antibody HPA050400
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.7
Sample id Sample description nTPM
Hippocampus
nTPM: 101.6
1898 Male, age 80, left hemisphere 108.3
2529 Female, age 94, left hemisphere 104.3
2621 Female, age 67, right hemisphere 101.1
1855 Male, age 76, left hemisphere 100.0
1911 Female, age 85, right hemisphere 98.3
2148 Female, age 91, left hemisphere 97.8
Dentate gyrus
nTPM: 102.8
2010 Male, age 76, both hemispheres 108.1
2530 Female, age 94, left hemisphere 104.6
2246 Female, age 85, both hemispheres 104.3
1927 Female, age 91, both hemispheres 102.2
2528 Male, age 74, both hemispheres 99.9
2531 Female, age 67, both hemispheres 98.0
Entorhinal gyrus
nTPM: 101.7
2764 Male, age 80, right hemisphere 106.1
1787 Male, age 76, left hemisphere 103.0
1938 Female, age 85, left hemisphere 101.7
2613 Female, age 94, left hemisphere 100.7
2117 Female, age 91, right hemisphere 99.5
2686 Male, age 75, right hemisphere 99.4
Hippocampus, CA1
nTPM: 105.7
2749 Male, age 80, left hemisphere 118.0
1873 Female, age 85, both hemispheres 105.8
2045 Male, age 76, both hemispheres 104.0
2527 Male, age 74, both hemispheres 103.1
2082 Female, age 91, right hemisphere 97.4
Hippocampus, CA2
nTPM: 100.9
1892 Male, age 76, both hemispheres 108.3
1963 Male, age 80, left hemisphere 104.5
2249 Male, age 74, both hemispheres 101.4
1940 Female, age 85, left hemisphere 97.9
2437 Female, age 94, left hemisphere 97.2
2113 Female, age 91, right hemisphere 96.0
Hippocampus, CA3
nTPM: 101.2
2620 Female, age 94, left hemisphere 107.2
2137 Male, age 80, left hemisphere 105.2
1867 Male, age 76, both hemispheres 103.2
1891 Female, age 85, both hemispheres 99.7
2436 Male, age 74, both hemispheres 96.2
2861 Female, age 67, both hemispheres 95.8
Parahippocampal cortex
nTPM: 99.3
1850 Male, age 80, both hemispheres 106.3
2018 Male, age 76, both hemispheres 102.3
1933 Female, age 85, both hemispheres 101.0
2245 Female, age 91, both hemispheres 99.7
2692 Male, age 74, both hemispheres 99.7
2250 Female, age 67, right hemisphere 99.5
2532 Female, age 72, left hemisphere 98.7
1990 Female, age 91, right hemisphere 98.3
2622 Female, age 67, right hemisphere 93.9
2693 Female, age 94, both hemispheres 93.5
Perirhinal gyrus
nTPM: 104.2
1794 Male, age 80, right hemisphere 109.2
1847 Female, age 91, left hemisphere 107.7
1841 Female, age 85, right hemisphere 106.5
2848 Male, age 76, right hemisphere 100.1
2521 Female, age 94, right hemisphere 97.4
Subiculum
nTPM: 98.5
1901 Male, age 80, both hemispheres 104.5
1977 Female, age 85, both hemispheres 103.9
2042 Male, age 76, both hemispheres 99.0
2619 Male, age 74, both hemispheres 96.1
2729 Female, age 91, right hemisphere 95.0
2438 Female, age 94, left hemisphere 92.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 120.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 120.4
Samples: 197

Max nTPM: 233.0
Min nTPM: 57.3
Std nTPM: 30.6
Median nTPM: 116.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 233.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 232.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 230.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 223.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 223.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 215.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 206.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 193.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 190.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 169.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 167.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.6
FF:10169-103B7 60 years, female 103.5
FF:10153-102I9 76 years, female 57.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.9
Samples: 4

Max nTPM: 56.4
Min nTPM: 36.1
Sample A Female 56.4
Sample B Female 39.2
Sample C Male 39.7
Sample D Male 36.1
Entorhinal cortex
nTPM: 26.0
Samples: 4

Max nTPM: 30.7
Min nTPM: 18.8
Sample A Female 27.0
Sample B Female 30.7
Sample C Male 27.5
Sample D Male 18.8
Subiculum
nTPM: 26.6
Samples: 4

Max nTPM: 34.3
Min nTPM: 23.0
Sample A Female 34.3
Sample B Female 23.0
Sample C Male 25.0
Sample D Male 24.2
Ventral hippocampus
nTPM: 33.2
Samples: 4

Max nTPM: 44.1
Min nTPM: 22.8
Sample A Female 29.8
Sample B Female 22.8
Sample C Male 36.1
Sample D Male 44.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.8
Samples: 4

Max nTPM: 47.9
Min nTPM: 38.8
Sample A Male 42.8
Sample B Male 47.9
Sample C Female 45.7
Sample D Female 38.8
Hippocampal formation
nTPM: 46.0
Samples: 4

Max nTPM: 49.3
Min nTPM: 39.2
Sample A Male 48.9
Sample B Male 46.6
Sample C Female 39.2
Sample D Female 49.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
68563134 Antisense, RP_050125_01_B09, Mouse strain C57BL/6J (56 days, male) 4.6

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