AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:52.7 nTPM
HPA:52.7 nTPM
GTEx:42.0 nTPM
FANTOM5:35.9 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:29.8 nTPM
Allen mouse:0.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 52.7
Sample id Sample description nTPM
Amygdala
nTPM: 43.8
2695 Female, age 67, right hemisphere 52.7
2814 Male, age 76, right hemisphere 45.2
2517 Female, age 94, left hemisphere 41.2
2514 Male, age 75, right hemisphere 40.3
1987 Female, age 91, left hemisphere 39.5
Basal amygdala
nTPM: 45.9
2827 Female, age 67, right hemisphere 70.3
2685 Female, age 94, left hemisphere 42.9
2609 Male, age 75, right hemisphere 42.6
2110 Male, age 80, left hemisphere 41.5
1955 Male, age 76, both hemispheres 39.8
2243 Female, age 91, right hemisphere 38.4
Central amygdala
nTPM: 48.4
2826 Female, age 94, left hemisphere 73.8
2515 Male, age 75, right hemisphere 45.5
1905 Male, age 76, both hemispheres 43.5
2239 Male, age 80, left hemisphere 40.9
2701 Female, age 91, right hemisphere 38.5
Corticomedial amygdala
nTPM: 38.9
2535 Female, age 67, right hemisphere 47.0
2428 Male, age 75, right hemisphere 39.9
2829 Male, age 80, left hemisphere 38.7
2240 Male, age 76, both hemispheres 36.9
2242 Female, age 91, right hemisphere 35.9
2429 Female, age 94, left hemisphere 35.0
Lateral amygdala
nTPM: 52.7
2830 Female, age 67, right hemisphere 85.8
2534 Female, age 94, left hemisphere 51.5
2516 Male, age 75, right hemisphere 49.5
2256 Male, age 80, left hemisphere 45.8
1883 Male, age 76, both hemispheres 43.6
2255 Female, age 91, right hemisphere 39.7
Stria terminalis, bed nucleus
nTPM: 36.5
1974 Female, age 91, both hemispheres 39.1
2201 Male, age 74, unknown 37.2
2486 Female, age 94, both hemispheres 33.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 42.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 42.0
Samples: 152

Max nTPM: 141.0
Min nTPM: 11.7
Std nTPM: 23.3
Median nTPM: 33.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 141.0
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 117.6
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 111.1
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 104.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 99.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 98.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 95.4
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 88.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 87.5
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 85.9
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 83.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 35.9
FF:10151-102I7 76 years, female 35.9

AMYGDALA - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Amygdala
nTPM: 13.4
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.3
Sample A Female 16.0
Sample B Female 12.6
Sample C Male 12.8
Sample D Male 12.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 29.8
Mouse sample Sample description nTPM
Amygdala
nTPM: 29.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 28.6
Sample A Male 28.6
Sample B Male 31.4
Sample C Female 28.7
Sample D Female 30.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.5
587432 Antisense, RP_040831_01_G06, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.