HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.5 nTPM
HPA:71.5 nTPM
GTEx:108.7 nTPM
FANTOM5:60.1 Scaled Tags Per Million
Pig:15.1 nTPM
Mouse:6.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052281
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.5
Sample id Sample description nTPM
Hippocampus
nTPM: 66.7
2529 Female, age 94, left hemisphere 72.0
1898 Male, age 80, left hemisphere 71.3
2621 Female, age 67, right hemisphere 66.4
1911 Female, age 85, right hemisphere 64.5
2148 Female, age 91, left hemisphere 64.5
1855 Male, age 76, left hemisphere 61.6
Dentate gyrus
nTPM: 64.9
2531 Female, age 67, both hemispheres 70.3
2530 Female, age 94, left hemisphere 66.6
2010 Male, age 76, both hemispheres 63.9
2246 Female, age 85, both hemispheres 63.9
2528 Male, age 74, both hemispheres 63.5
1927 Female, age 91, both hemispheres 61.1
Entorhinal gyrus
nTPM: 71.5
2686 Male, age 75, right hemisphere 73.4
1938 Female, age 85, left hemisphere 73.0
2613 Female, age 94, left hemisphere 72.1
2764 Male, age 80, right hemisphere 71.7
1787 Male, age 76, left hemisphere 70.7
2117 Female, age 91, right hemisphere 68.0
Hippocampus, CA1
nTPM: 65.3
2749 Male, age 80, left hemisphere 69.0
2082 Female, age 91, right hemisphere 67.8
2527 Male, age 74, both hemispheres 64.3
1873 Female, age 85, both hemispheres 62.9
2045 Male, age 76, both hemispheres 62.4
Hippocampus, CA2
nTPM: 64.5
2437 Female, age 94, left hemisphere 69.1
1963 Male, age 80, left hemisphere 67.4
2113 Female, age 91, right hemisphere 64.5
1940 Female, age 85, left hemisphere 63.3
1892 Male, age 76, both hemispheres 62.0
2249 Male, age 74, both hemispheres 60.7
Hippocampus, CA3
nTPM: 65.8
2861 Female, age 67, both hemispheres 78.6
2137 Male, age 80, left hemisphere 67.8
1867 Male, age 76, both hemispheres 63.5
1891 Female, age 85, both hemispheres 62.6
2620 Female, age 94, left hemisphere 61.6
2436 Male, age 74, both hemispheres 60.9
Parahippocampal cortex
nTPM: 68.0
2622 Female, age 67, right hemisphere 73.1
1933 Female, age 85, both hemispheres 71.4
2692 Male, age 74, both hemispheres 69.8
2532 Female, age 72, left hemisphere 69.1
2245 Female, age 91, both hemispheres 68.7
1990 Female, age 91, right hemisphere 67.7
1850 Male, age 80, both hemispheres 66.4
2250 Female, age 67, right hemisphere 66.4
2018 Male, age 76, both hemispheres 65.5
2693 Female, age 94, both hemispheres 62.3
Perirhinal gyrus
nTPM: 68.3
1794 Male, age 80, right hemisphere 74.6
1847 Female, age 91, left hemisphere 72.3
2521 Female, age 94, right hemisphere 68.9
1841 Female, age 85, right hemisphere 65.7
2848 Male, age 76, right hemisphere 60.2
Subiculum
nTPM: 67.7
2619 Male, age 74, both hemispheres 72.0
1977 Female, age 85, both hemispheres 70.7
1901 Male, age 80, both hemispheres 68.9
2438 Female, age 94, left hemisphere 68.2
2729 Female, age 91, right hemisphere 64.3
2042 Male, age 76, both hemispheres 62.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 108.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 108.7
Samples: 197

Max nTPM: 313.5
Min nTPM: 32.4
Std nTPM: 39.0
Median nTPM: 101.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 313.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 301.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 206.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 202.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 202.8
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 196.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 194.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 192.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 188.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 181.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 177.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.1
FF:10153-102I9 76 years, female 63.7
FF:10169-103B7 60 years, female 56.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 18.1
Min nTPM: 9.1
Sample A Female 18.1
Sample B Female 15.5
Sample C Male 14.1
Sample D Male 9.1
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 18.9
Min nTPM: 11.8
Sample A Female 11.8
Sample B Female 18.9
Sample C Male 17.3
Sample D Male 12.2
Subiculum
nTPM: 12.4
Samples: 4

Max nTPM: 14.4
Min nTPM: 9.7
Sample A Female 14.4
Sample B Female 13.7
Sample C Male 11.7
Sample D Male 9.7
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.6
Min nTPM: 13.3
Sample A Female 14.6
Sample B Female 13.3
Sample C Male 17.6
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.5
Sample A Male 5.5
Sample B Male 6.5
Sample C Female 6.4
Sample D Female 5.5
Hippocampal formation
nTPM: 6.2
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.4
Sample A Male 5.9
Sample B Male 5.4
Sample C Female 6.6
Sample D Female 6.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71656695 Antisense, RP_050927_04_B03, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.