HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.5 nTPM
HPA:16.5 nTPM
GTEx:19.6 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Mouse:15.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
1898 Male, age 80, left hemisphere 17.3
1911 Female, age 85, right hemisphere 14.9
2621 Female, age 67, right hemisphere 14.5
1855 Male, age 76, left hemisphere 14.1
2529 Female, age 94, left hemisphere 13.1
2148 Female, age 91, left hemisphere 11.7
Dentate gyrus
nTPM: 14.3
2531 Female, age 67, both hemispheres 16.0
2528 Male, age 74, both hemispheres 15.8
2010 Male, age 76, both hemispheres 15.3
2530 Female, age 94, left hemisphere 13.9
2246 Female, age 85, both hemispheres 12.5
1927 Female, age 91, both hemispheres 12.3
Entorhinal gyrus
nTPM: 15.2
2613 Female, age 94, left hemisphere 19.7
2764 Male, age 80, right hemisphere 19.1
1938 Female, age 85, left hemisphere 16.3
1787 Male, age 76, left hemisphere 12.5
2686 Male, age 75, right hemisphere 12.1
2117 Female, age 91, right hemisphere 11.5
Hippocampus, CA1
nTPM: 16.5
2082 Female, age 91, right hemisphere 19.7
2045 Male, age 76, both hemispheres 17.4
2749 Male, age 80, left hemisphere 16.8
1873 Female, age 85, both hemispheres 14.8
2527 Male, age 74, both hemispheres 13.9
Hippocampus, CA2
nTPM: 14.6
2113 Female, age 91, right hemisphere 20.3
1963 Male, age 80, left hemisphere 14.5
2249 Male, age 74, both hemispheres 14.5
2437 Female, age 94, left hemisphere 13.6
1892 Male, age 76, both hemispheres 13.3
1940 Female, age 85, left hemisphere 11.6
Hippocampus, CA3
nTPM: 14.6
2861 Female, age 67, both hemispheres 16.9
1867 Male, age 76, both hemispheres 15.0
1891 Female, age 85, both hemispheres 14.7
2620 Female, age 94, left hemisphere 13.9
2436 Male, age 74, both hemispheres 13.7
2137 Male, age 80, left hemisphere 13.6
Parahippocampal cortex
nTPM: 13.3
1850 Male, age 80, both hemispheres 15.2
1933 Female, age 85, both hemispheres 15.1
2693 Female, age 94, both hemispheres 14.7
2245 Female, age 91, both hemispheres 13.0
2532 Female, age 72, left hemisphere 13.0
2250 Female, age 67, right hemisphere 12.9
1990 Female, age 91, right hemisphere 12.4
2622 Female, age 67, right hemisphere 12.3
2018 Male, age 76, both hemispheres 12.2
2692 Male, age 74, both hemispheres 11.9
Perirhinal gyrus
nTPM: 13.8
1794 Male, age 80, right hemisphere 14.7
1841 Female, age 85, right hemisphere 14.6
2848 Male, age 76, right hemisphere 14.4
2521 Female, age 94, right hemisphere 12.9
1847 Female, age 91, left hemisphere 12.3
Subiculum
nTPM: 13.7
1977 Female, age 85, both hemispheres 18.0
2438 Female, age 94, left hemisphere 15.4
1901 Male, age 80, both hemispheres 12.9
2619 Male, age 74, both hemispheres 12.5
2042 Male, age 76, both hemispheres 12.4
2729 Female, age 91, right hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.6
Samples: 197

Max nTPM: 207.2
Min nTPM: 2.9
Std nTPM: 22.0
Median nTPM: 12.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 207.2
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 112.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 98.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 78.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 75.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 69.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 68.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 64.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 62.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 61.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 58.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.5
FF:10153-102I9 76 years, female 21.8
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.8
Samples: 4

Max nTPM: 16.9
Min nTPM: 8.0
Sample A Male 8.0
Sample B Male 9.4
Sample C Female 16.9
Sample D Female 16.9
Hippocampal formation
nTPM: 15.7
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.2
Sample A Male 17.3
Sample B Male 12.2
Sample C Female 16.2
Sample D Female 17.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
79912577 Antisense, RP_071204_04_E04, Mouse strain C57BL/6J (56 days, male) 0.3
74272920 Antisense, RP_050921_03_C05, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.