HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:64.0 nTPM
HPA:64.0 nTPM
GTEx:57.0 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:13.6 nTPM
Mouse:18.3 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027202
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.0
Sample id Sample description nTPM
Hippocampus
nTPM: 63.4
1911 Female, age 85, right hemisphere 66.7
2529 Female, age 94, left hemisphere 63.6
1898 Male, age 80, left hemisphere 63.2
2148 Female, age 91, left hemisphere 63.1
1855 Male, age 76, left hemisphere 62.0
2621 Female, age 67, right hemisphere 61.8
Dentate gyrus
nTPM: 61.7
2528 Male, age 74, both hemispheres 64.7
1927 Female, age 91, both hemispheres 63.8
2246 Female, age 85, both hemispheres 63.0
2010 Male, age 76, both hemispheres 61.2
2531 Female, age 67, both hemispheres 59.9
2530 Female, age 94, left hemisphere 57.6
Entorhinal gyrus
nTPM: 62.3
2117 Female, age 91, right hemisphere 65.9
2686 Male, age 75, right hemisphere 63.6
1938 Female, age 85, left hemisphere 62.3
1787 Male, age 76, left hemisphere 61.7
2764 Male, age 80, right hemisphere 61.6
2613 Female, age 94, left hemisphere 58.9
Hippocampus, CA1
nTPM: 64.0
2527 Male, age 74, both hemispheres 64.9
1873 Female, age 85, both hemispheres 64.7
2082 Female, age 91, right hemisphere 64.5
2045 Male, age 76, both hemispheres 64.3
2749 Male, age 80, left hemisphere 61.6
Hippocampus, CA2
nTPM: 64.0
1940 Female, age 85, left hemisphere 67.1
2113 Female, age 91, right hemisphere 66.7
2249 Male, age 74, both hemispheres 65.5
1892 Male, age 76, both hemispheres 62.3
1963 Male, age 80, left hemisphere 61.9
2437 Female, age 94, left hemisphere 60.6
Hippocampus, CA3
nTPM: 62.6
1891 Female, age 85, both hemispheres 66.0
2436 Male, age 74, both hemispheres 64.3
2137 Male, age 80, left hemisphere 63.6
1867 Male, age 76, both hemispheres 62.4
2620 Female, age 94, left hemisphere 61.1
2861 Female, age 67, both hemispheres 58.1
Parahippocampal cortex
nTPM: 63.2
2250 Female, age 67, right hemisphere 65.4
2693 Female, age 94, both hemispheres 65.0
2692 Male, age 74, both hemispheres 64.9
2018 Male, age 76, both hemispheres 64.8
2532 Female, age 72, left hemisphere 64.2
1850 Male, age 80, both hemispheres 64.1
2245 Female, age 91, both hemispheres 62.4
1933 Female, age 85, both hemispheres 61.8
1990 Female, age 91, right hemisphere 61.2
2622 Female, age 67, right hemisphere 58.3
Perirhinal gyrus
nTPM: 62.6
1841 Female, age 85, right hemisphere 64.5
1847 Female, age 91, left hemisphere 64.2
1794 Male, age 80, right hemisphere 63.2
2848 Male, age 76, right hemisphere 60.7
2521 Female, age 94, right hemisphere 60.2
Subiculum
nTPM: 63.1
2729 Female, age 91, right hemisphere 65.7
2042 Male, age 76, both hemispheres 65.5
1901 Male, age 80, both hemispheres 64.5
1977 Female, age 85, both hemispheres 62.3
2619 Male, age 74, both hemispheres 62.2
2438 Female, age 94, left hemisphere 58.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.0
Samples: 197

Max nTPM: 167.3
Min nTPM: 30.3
Std nTPM: 14.1
Median nTPM: 55.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 167.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 94.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 89.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 88.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 88.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 87.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 84.2
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 83.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 82.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 79.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 77.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 28.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.0
Sample A Female 16.0
Sample B Female 13.0
Sample C Male 14.3
Sample D Male 11.0
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 14.0
Min nTPM: 8.3
Sample A Female 11.2
Sample B Female 14.0
Sample C Male 11.5
Sample D Male 8.3
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.3
Sample A Female 16.5
Sample B Female 11.8
Sample C Male 10.3
Sample D Male 10.4
Ventral hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 14.4
Min nTPM: 10.8
Sample A Female 14.4
Sample B Female 11.6
Sample C Male 10.8
Sample D Male 12.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 18.9
Min nTPM: 14.4
Sample A Male 18.9
Sample B Male 17.7
Sample C Female 15.8
Sample D Female 14.4
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 16.6
Sample A Male 19.7
Sample B Male 18.1
Sample C Female 16.6
Sample D Female 18.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
68744612 Antisense, RP_050208_01_C04, Mouse strain C57BL/6J (56 days, male) 1.1
75259441 Antisense, RP_051214_02_E05, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

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