HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:21.0 nTPM
HPA:21.0 nTPM
GTEx:24.3 nTPM
FANTOM5:18.9 Scaled Tags Per Million
Pig:7.1 nTPM
Mouse:23.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020092
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Hippocampus
nTPM: 20.9
2621 Female, age 67, right hemisphere 21.7
2529 Female, age 94, left hemisphere 21.6
1898 Male, age 80, left hemisphere 21.5
1911 Female, age 85, right hemisphere 20.5
2148 Female, age 91, left hemisphere 20.3
1855 Male, age 76, left hemisphere 20.0
Dentate gyrus
nTPM: 19.9
2530 Female, age 94, left hemisphere 20.8
2010 Male, age 76, both hemispheres 20.5
2531 Female, age 67, both hemispheres 19.8
1927 Female, age 91, both hemispheres 19.7
2246 Female, age 85, both hemispheres 19.7
2528 Male, age 74, both hemispheres 19.0
Entorhinal gyrus
nTPM: 20.5
2117 Female, age 91, right hemisphere 21.2
2613 Female, age 94, left hemisphere 21.1
2764 Male, age 80, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.6
2686 Male, age 75, right hemisphere 20.1
1938 Female, age 85, left hemisphere 19.5
Hippocampus, CA1
nTPM: 21.0
2749 Male, age 80, left hemisphere 23.5
2527 Male, age 74, both hemispheres 22.0
2082 Female, age 91, right hemisphere 20.7
1873 Female, age 85, both hemispheres 19.8
2045 Male, age 76, both hemispheres 19.1
Hippocampus, CA2
nTPM: 20.6
2249 Male, age 74, both hemispheres 21.5
1892 Male, age 76, both hemispheres 21.0
1963 Male, age 80, left hemisphere 20.9
2113 Female, age 91, right hemisphere 20.5
2437 Female, age 94, left hemisphere 20.5
1940 Female, age 85, left hemisphere 19.4
Hippocampus, CA3
nTPM: 20.5
2436 Male, age 74, both hemispheres 21.3
2137 Male, age 80, left hemisphere 20.9
1891 Female, age 85, both hemispheres 20.5
1867 Male, age 76, both hemispheres 20.3
2620 Female, age 94, left hemisphere 20.2
2861 Female, age 67, both hemispheres 20.0
Parahippocampal cortex
nTPM: 20.3
1933 Female, age 85, both hemispheres 21.0
2692 Male, age 74, both hemispheres 20.8
2250 Female, age 67, right hemisphere 20.7
1990 Female, age 91, right hemisphere 20.6
2018 Male, age 76, both hemispheres 20.6
1850 Male, age 80, both hemispheres 20.4
2622 Female, age 67, right hemisphere 20.3
2532 Female, age 72, left hemisphere 19.8
2245 Female, age 91, both hemispheres 19.6
2693 Female, age 94, both hemispheres 19.2
Perirhinal gyrus
nTPM: 20.3
1847 Female, age 91, left hemisphere 22.1
1794 Male, age 80, right hemisphere 20.7
1841 Female, age 85, right hemisphere 20.4
2521 Female, age 94, right hemisphere 19.5
2848 Male, age 76, right hemisphere 19.0
Subiculum
nTPM: 20.8
1901 Male, age 80, both hemispheres 22.0
1977 Female, age 85, both hemispheres 21.1
2042 Male, age 76, both hemispheres 20.8
2619 Male, age 74, both hemispheres 20.7
2438 Female, age 94, left hemisphere 20.6
2729 Female, age 91, right hemisphere 19.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 56.4
Min nTPM: 11.3
Std nTPM: 7.5
Median nTPM: 22.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 56.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 42.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 42.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 41.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 41.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 39.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 38.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 37.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.9
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 14.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.0
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.4
Sample A Female 8.6
Sample B Female 7.0
Sample C Male 6.9
Sample D Male 5.4
Entorhinal cortex
nTPM: 7.0
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 6.7
Sample C Male 8.1
Sample D Male 7.1
Subiculum
nTPM: 6.2
Samples: 4

Max nTPM: 8.3
Min nTPM: 5.0
Sample A Female 8.3
Sample B Female 5.3
Sample C Male 6.3
Sample D Male 5.0
Ventral hippocampus
nTPM: 7.1
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.2
Sample A Female 7.7
Sample B Female 5.2
Sample C Male 8.7
Sample D Male 6.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 24.5
Min nTPM: 20.5
Sample A Male 20.5
Sample B Male 22.2
Sample C Female 21.3
Sample D Female 24.5
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 25.8
Min nTPM: 21.4
Sample A Male 25.8
Sample B Male 23.4
Sample C Female 21.4
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
68637951 Antisense, RP_050126_01_H12, Mouse strain C57BL/6J (56 days, male) 2.4

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