HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:32.3 nTPM
HPA:32.3 nTPM
GTEx:29.6 nTPM
FANTOM5:91.0 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:52.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041274Antibody HPA061189
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 28.1
2148 Female, age 91, left hemisphere 31.8
1898 Male, age 80, left hemisphere 29.7
2621 Female, age 67, right hemisphere 29.0
1855 Male, age 76, left hemisphere 26.9
2529 Female, age 94, left hemisphere 26.5
1911 Female, age 85, right hemisphere 24.9
Dentate gyrus
nTPM: 27.7
1927 Female, age 91, both hemispheres 29.3
2530 Female, age 94, left hemisphere 29.1
2246 Female, age 85, both hemispheres 28.1
2010 Male, age 76, both hemispheres 27.5
2531 Female, age 67, both hemispheres 26.8
2528 Male, age 74, both hemispheres 25.5
Entorhinal gyrus
nTPM: 31.7
2613 Female, age 94, left hemisphere 36.7
2764 Male, age 80, right hemisphere 35.3
1938 Female, age 85, left hemisphere 32.9
1787 Male, age 76, left hemisphere 32.4
2117 Female, age 91, right hemisphere 27.5
2686 Male, age 75, right hemisphere 25.6
Hippocampus, CA1
nTPM: 30.0
2749 Male, age 80, left hemisphere 40.8
1873 Female, age 85, both hemispheres 28.2
2527 Male, age 74, both hemispheres 28.0
2045 Male, age 76, both hemispheres 26.7
2082 Female, age 91, right hemisphere 26.3
Hippocampus, CA2
nTPM: 28.4
1963 Male, age 80, left hemisphere 30.6
1892 Male, age 76, both hemispheres 29.9
2437 Female, age 94, left hemisphere 28.6
2249 Male, age 74, both hemispheres 28.4
1940 Female, age 85, left hemisphere 26.8
2113 Female, age 91, right hemisphere 25.8
Hippocampus, CA3
nTPM: 28.5
2620 Female, age 94, left hemisphere 34.5
2137 Male, age 80, left hemisphere 33.9
2861 Female, age 67, both hemispheres 27.4
1867 Male, age 76, both hemispheres 25.6
2436 Male, age 74, both hemispheres 25.5
1891 Female, age 85, both hemispheres 24.3
Parahippocampal cortex
nTPM: 29.4
2532 Female, age 72, left hemisphere 33.2
1933 Female, age 85, both hemispheres 31.7
2245 Female, age 91, both hemispheres 30.4
1850 Male, age 80, both hemispheres 29.9
1990 Female, age 91, right hemisphere 29.8
2622 Female, age 67, right hemisphere 29.5
2250 Female, age 67, right hemisphere 27.7
2692 Male, age 74, both hemispheres 27.7
2693 Female, age 94, both hemispheres 27.4
2018 Male, age 76, both hemispheres 26.5
Perirhinal gyrus
nTPM: 32.3
1794 Male, age 80, right hemisphere 35.9
1841 Female, age 85, right hemisphere 32.5
1847 Female, age 91, left hemisphere 32.1
2521 Female, age 94, right hemisphere 30.9
2848 Male, age 76, right hemisphere 30.2
Subiculum
nTPM: 27.0
1977 Female, age 85, both hemispheres 31.9
2619 Male, age 74, both hemispheres 28.4
1901 Male, age 80, both hemispheres 27.2
2729 Female, age 91, right hemisphere 26.2
2438 Female, age 94, left hemisphere 24.5
2042 Male, age 76, both hemispheres 23.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.6
Samples: 197

Max nTPM: 50.0
Min nTPM: 14.4
Std nTPM: 7.1
Median nTPM: 28.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 50.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 49.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 48.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 45.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 43.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 42.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 41.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 41.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 91.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 91.0
FF:10169-103B7 60 years, female 108.8
FF:10153-102I9 76 years, female 73.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.6
Samples: 4

Max nTPM: 44.0
Min nTPM: 27.2
Sample A Female 44.0
Sample B Female 41.4
Sample C Male 29.8
Sample D Male 27.2
Entorhinal cortex
nTPM: 34.3
Samples: 4

Max nTPM: 38.0
Min nTPM: 30.7
Sample A Female 38.0
Sample B Female 30.7
Sample C Male 36.9
Sample D Male 31.4
Subiculum
nTPM: 35.9
Samples: 4

Max nTPM: 45.2
Min nTPM: 30.5
Sample A Female 45.2
Sample B Female 32.9
Sample C Male 35.0
Sample D Male 30.5
Ventral hippocampus
nTPM: 35.7
Samples: 4

Max nTPM: 41.5
Min nTPM: 27.9
Sample A Female 34.4
Sample B Female 27.9
Sample C Male 41.5
Sample D Male 38.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.1
Samples: 4

Max nTPM: 55.0
Min nTPM: 48.1
Sample A Male 50.9
Sample B Male 54.3
Sample C Female 48.1
Sample D Female 55.0
Hippocampal formation
nTPM: 50.6
Samples: 4

Max nTPM: 53.2
Min nTPM: 47.9
Sample A Male 48.1
Sample B Male 53.1
Sample C Female 53.2
Sample D Female 47.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71495944 Antisense, RP_050913_03_H05, Mouse strain C57BL/6J (56 days, male) 0.2

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