HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:60.8 nTPM
HPA:60.8 nTPM
GTEx:56.2 nTPM
FANTOM5:202.1 Scaled Tags Per Million
Pig:72.7 nTPM
Mouse:90.9 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB013249Antibody CAB015179
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.8
Sample id Sample description nTPM
Hippocampus
nTPM: 49.6
1911 Female, age 85, right hemisphere 63.5
1898 Male, age 80, left hemisphere 59.8
2621 Female, age 67, right hemisphere 50.3
2148 Female, age 91, left hemisphere 49.6
1855 Male, age 76, left hemisphere 45.3
2529 Female, age 94, left hemisphere 29.0
Dentate gyrus
nTPM: 53.6
1927 Female, age 91, both hemispheres 70.2
2531 Female, age 67, both hemispheres 63.6
2246 Female, age 85, both hemispheres 55.8
2010 Male, age 76, both hemispheres 52.9
2530 Female, age 94, left hemisphere 48.1
2528 Male, age 74, both hemispheres 30.8
Entorhinal gyrus
nTPM: 51.9
2613 Female, age 94, left hemisphere 66.0
2764 Male, age 80, right hemisphere 62.1
1938 Female, age 85, left hemisphere 50.4
2117 Female, age 91, right hemisphere 47.0
1787 Male, age 76, left hemisphere 44.9
2686 Male, age 75, right hemisphere 41.0
Hippocampus, CA1
nTPM: 60.8
2749 Male, age 80, left hemisphere 121.4
1873 Female, age 85, both hemispheres 69.9
2045 Male, age 76, both hemispheres 53.0
2527 Male, age 74, both hemispheres 31.0
2082 Female, age 91, right hemisphere 28.5
Hippocampus, CA2
nTPM: 47.0
1963 Male, age 80, left hemisphere 77.1
1892 Male, age 76, both hemispheres 71.9
2437 Female, age 94, left hemisphere 36.8
2113 Female, age 91, right hemisphere 35.5
1940 Female, age 85, left hemisphere 31.3
2249 Male, age 74, both hemispheres 29.6
Hippocampus, CA3
nTPM: 57.6
2137 Male, age 80, left hemisphere 98.2
2620 Female, age 94, left hemisphere 80.5
1891 Female, age 85, both hemispheres 74.7
1867 Male, age 76, both hemispheres 52.4
2861 Female, age 67, both hemispheres 29.9
2436 Male, age 74, both hemispheres 9.7
Parahippocampal cortex
nTPM: 42.9
1850 Male, age 80, both hemispheres 66.2
1990 Female, age 91, right hemisphere 55.8
2532 Female, age 72, left hemisphere 51.1
2693 Female, age 94, both hemispheres 50.3
1933 Female, age 85, both hemispheres 49.1
2245 Female, age 91, both hemispheres 46.6
2692 Male, age 74, both hemispheres 42.0
2018 Male, age 76, both hemispheres 30.3
2250 Female, age 67, right hemisphere 24.2
2622 Female, age 67, right hemisphere 13.5
Perirhinal gyrus
nTPM: 51.3
2521 Female, age 94, right hemisphere 63.8
1794 Male, age 80, right hemisphere 53.7
1847 Female, age 91, left hemisphere 48.3
1841 Female, age 85, right hemisphere 45.5
2848 Male, age 76, right hemisphere 45.4
Subiculum
nTPM: 54.8
1901 Male, age 80, both hemispheres 98.1
1977 Female, age 85, both hemispheres 64.6
2438 Female, age 94, left hemisphere 63.8
2042 Male, age 76, both hemispheres 50.9
2729 Female, age 91, right hemisphere 26.4
2619 Male, age 74, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.2
Samples: 197

Max nTPM: 138.2
Min nTPM: 15.6
Std nTPM: 20.6
Median nTPM: 54.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 138.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 124.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 117.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 111.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 111.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 102.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 98.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 98.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 97.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 96.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 94.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 202.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 202.1
FF:10169-103B7 60 years, female 209.2
FF:10153-102I9 76 years, female 195.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 72.6
Samples: 4

Max nTPM: 88.6
Min nTPM: 50.0
Sample A Female 88.6
Sample B Female 70.7
Sample C Male 81.2
Sample D Male 50.0
Entorhinal cortex
nTPM: 60.4
Samples: 4

Max nTPM: 74.2
Min nTPM: 49.7
Sample A Female 57.3
Sample B Female 74.2
Sample C Male 49.7
Sample D Male 60.2
Subiculum
nTPM: 51.6
Samples: 4

Max nTPM: 65.3
Min nTPM: 43.5
Sample A Female 65.3
Sample B Female 48.8
Sample C Male 48.9
Sample D Male 43.5
Ventral hippocampus
nTPM: 63.4
Samples: 4

Max nTPM: 78.7
Min nTPM: 47.4
Sample A Female 64.5
Sample B Female 47.4
Sample C Male 62.8
Sample D Male 78.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.8
Samples: 4

Max nTPM: 103.2
Min nTPM: 80.8
Sample A Male 94.3
Sample B Male 80.8
Sample C Female 85.0
Sample D Female 103.2
Hippocampal formation
nTPM: 91.0
Samples: 4

Max nTPM: 122.8
Min nTPM: 61.5
Sample A Male 61.5
Sample B Male 104.8
Sample C Female 122.8
Sample D Female 74.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
74047925 Antisense, RP_051214_02_D10, Mouse strain C57BL/6J (56 days, male) 20.5
68196979 Antisense, RP_040928_01_A10, Mouse strain C57BL/6J (56 days, male) 19.4
70795823 Antisense, RP_050712_02_A07, Mouse strain C57BL/6J (56 days, male) 4.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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