HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:10.7 nTPM
FANTOM5:62.8 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:29.0 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030264
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.3
2529 Female, age 94, left hemisphere 11.9
2148 Female, age 91, left hemisphere 11.4
1911 Female, age 85, right hemisphere 8.8
2621 Female, age 67, right hemisphere 8.8
1855 Male, age 76, left hemisphere 7.8
1898 Male, age 80, left hemisphere 7.3
Dentate gyrus
nTPM: 12.7
2531 Female, age 67, both hemispheres 16.1
2246 Female, age 85, both hemispheres 14.6
2530 Female, age 94, left hemisphere 12.5
2528 Male, age 74, both hemispheres 11.9
2010 Male, age 76, both hemispheres 11.6
1927 Female, age 91, both hemispheres 9.7
Entorhinal gyrus
nTPM: 12.0
2764 Male, age 80, right hemisphere 16.3
2613 Female, age 94, left hemisphere 13.4
2117 Female, age 91, right hemisphere 12.1
2686 Male, age 75, right hemisphere 11.8
1787 Male, age 76, left hemisphere 9.1
1938 Female, age 85, left hemisphere 9.1
Hippocampus, CA1
nTPM: 12.9
2749 Male, age 80, left hemisphere 16.3
2082 Female, age 91, right hemisphere 15.8
2045 Male, age 76, both hemispheres 11.4
1873 Female, age 85, both hemispheres 10.5
2527 Male, age 74, both hemispheres 10.3
Hippocampus, CA2
nTPM: 10.3
1963 Male, age 80, left hemisphere 13.1
2113 Female, age 91, right hemisphere 11.6
2437 Female, age 94, left hemisphere 10.8
2249 Male, age 74, both hemispheres 10.0
1940 Female, age 85, left hemisphere 9.4
1892 Male, age 76, both hemispheres 6.7
Hippocampus, CA3
nTPM: 13.0
2137 Male, age 80, left hemisphere 19.6
2620 Female, age 94, left hemisphere 19.6
1891 Female, age 85, both hemispheres 12.4
2861 Female, age 67, both hemispheres 11.7
1867 Male, age 76, both hemispheres 7.6
2436 Male, age 74, both hemispheres 7.2
Parahippocampal cortex
nTPM: 9.7
2692 Male, age 74, both hemispheres 13.9
2532 Female, age 72, left hemisphere 12.0
2018 Male, age 76, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.5
1990 Female, age 91, right hemisphere 9.7
1850 Male, age 80, both hemispheres 8.8
1933 Female, age 85, both hemispheres 8.7
2245 Female, age 91, both hemispheres 8.6
2622 Female, age 67, right hemisphere 8.1
2250 Female, age 67, right hemisphere 5.7
Perirhinal gyrus
nTPM: 7.7
2521 Female, age 94, right hemisphere 9.7
2848 Male, age 76, right hemisphere 8.0
1794 Male, age 80, right hemisphere 7.9
1847 Female, age 91, left hemisphere 7.0
1841 Female, age 85, right hemisphere 5.9
Subiculum
nTPM: 13.6
1901 Male, age 80, both hemispheres 17.3
2438 Female, age 94, left hemisphere 13.9
1977 Female, age 85, both hemispheres 13.3
2042 Male, age 76, both hemispheres 13.3
2619 Male, age 74, both hemispheres 12.2
2729 Female, age 91, right hemisphere 11.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.7
Samples: 197

Max nTPM: 21.3
Min nTPM: 6.3
Std nTPM: 2.4
Median nTPM: 10.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 19.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 18.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 17.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 17.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 16.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 16.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 15.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 15.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.8
FF:10153-102I9 76 years, female 72.3
FF:10169-103B7 60 years, female 53.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.3
Sample A Female 22.2
Sample B Female 20.8
Sample C Male 18.5
Sample D Male 16.3
Entorhinal cortex
nTPM: 19.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 18.9
Sample A Female 21.2
Sample B Female 19.2
Sample C Male 19.8
Sample D Male 18.9
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 23.7
Min nTPM: 15.1
Sample A Female 23.7
Sample B Female 15.9
Sample C Male 16.9
Sample D Male 15.1
Ventral hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 21.2
Min nTPM: 13.6
Sample A Female 16.1
Sample B Female 13.6
Sample C Male 20.7
Sample D Male 21.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 33.2
Min nTPM: 25.8
Sample A Male 27.8
Sample B Male 26.1
Sample C Female 25.8
Sample D Female 33.2
Hippocampal formation
nTPM: 29.0
Samples: 4

Max nTPM: 33.4
Min nTPM: 23.4
Sample A Male 26.6
Sample B Male 32.6
Sample C Female 33.4
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
70946185 Antisense, RP_050414_01_D11, Mouse strain C57BL/6J (56 days, male) 1.8

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