HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:9.9 nTPM
FANTOM5:13.2 Scaled Tags Per Million
Pig:13.1 nTPM
Mouse:19.4 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 11.6
2529 Female, age 94, left hemisphere 12.7
1898 Male, age 80, left hemisphere 11.9
2621 Female, age 67, right hemisphere 11.7
2148 Female, age 91, left hemisphere 11.3
1911 Female, age 85, right hemisphere 11.0
1855 Male, age 76, left hemisphere 10.7
Dentate gyrus
nTPM: 11.2
2531 Female, age 67, both hemispheres 12.3
2246 Female, age 85, both hemispheres 11.6
1927 Female, age 91, both hemispheres 11.4
2530 Female, age 94, left hemisphere 11.2
2010 Male, age 76, both hemispheres 10.6
2528 Male, age 74, both hemispheres 10.4
Entorhinal gyrus
nTPM: 11.7
1938 Female, age 85, left hemisphere 12.8
2686 Male, age 75, right hemisphere 12.4
2764 Male, age 80, right hemisphere 11.7
2117 Female, age 91, right hemisphere 11.4
1787 Male, age 76, left hemisphere 11.2
2613 Female, age 94, left hemisphere 10.8
Hippocampus, CA1
nTPM: 11.5
2045 Male, age 76, both hemispheres 12.2
2749 Male, age 80, left hemisphere 11.8
1873 Female, age 85, both hemispheres 11.6
2082 Female, age 91, right hemisphere 10.9
2527 Male, age 74, both hemispheres 10.8
Hippocampus, CA2
nTPM: 11.4
1892 Male, age 76, both hemispheres 12.3
1940 Female, age 85, left hemisphere 11.9
1963 Male, age 80, left hemisphere 11.5
2113 Female, age 91, right hemisphere 11.1
2437 Female, age 94, left hemisphere 11.1
2249 Male, age 74, both hemispheres 10.4
Hippocampus, CA3
nTPM: 11.1
2137 Male, age 80, left hemisphere 12.8
1891 Female, age 85, both hemispheres 11.4
1867 Male, age 76, both hemispheres 11.0
2620 Female, age 94, left hemisphere 10.8
2861 Female, age 67, both hemispheres 10.8
2436 Male, age 74, both hemispheres 10.1
Parahippocampal cortex
nTPM: 11.7
1850 Male, age 80, both hemispheres 13.8
2532 Female, age 72, left hemisphere 12.4
2692 Male, age 74, both hemispheres 12.1
1990 Female, age 91, right hemisphere 11.9
2245 Female, age 91, both hemispheres 11.8
2622 Female, age 67, right hemisphere 11.4
1933 Female, age 85, both hemispheres 11.3
2018 Male, age 76, both hemispheres 11.1
2693 Female, age 94, both hemispheres 10.8
2250 Female, age 67, right hemisphere 10.6
Perirhinal gyrus
nTPM: 12.5
1794 Male, age 80, right hemisphere 13.2
2848 Male, age 76, right hemisphere 13.0
1847 Female, age 91, left hemisphere 12.3
1841 Female, age 85, right hemisphere 12.2
2521 Female, age 94, right hemisphere 11.8
Subiculum
nTPM: 11.6
2438 Female, age 94, left hemisphere 13.4
1901 Male, age 80, both hemispheres 12.2
1977 Female, age 85, both hemispheres 11.6
2619 Male, age 74, both hemispheres 11.2
2042 Male, age 76, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.9
Samples: 197

Max nTPM: 19.3
Min nTPM: 5.9
Std nTPM: 2.3
Median nTPM: 9.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 19.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 18.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 17.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 17.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 16.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 15.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 15.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 14.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 14.7
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 14.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.2
FF:10153-102I9 76 years, female 17.1
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 13.4
Min nTPM: 12.1
Sample A Female 12.2
Sample B Female 13.4
Sample C Male 13.4
Sample D Male 12.1
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 13.5
Min nTPM: 12.8
Sample A Female 13.5
Sample B Female 13.1
Sample C Male 13.0
Sample D Male 12.8
Subiculum
nTPM: 12.2
Samples: 4

Max nTPM: 14.7
Min nTPM: 11.1
Sample A Female 14.7
Sample B Female 11.2
Sample C Male 11.1
Sample D Male 11.6
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 13.0
Min nTPM: 9.4
Sample A Female 12.1
Sample B Female 11.7
Sample C Male 9.4
Sample D Male 13.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.4
Sample A Male 19.9
Sample B Male 17.6
Sample C Female 16.4
Sample D Female 18.8
Hippocampal formation
nTPM: 19.5
Samples: 4

Max nTPM: 24.4
Min nTPM: 15.5
Sample A Male 15.5
Sample B Male 24.4
Sample C Female 21.6
Sample D Female 16.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.