HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:194.6 nTPM
HPA:194.6 nTPM
GTEx:181.9 nTPM
FANTOM5:324.9 Scaled Tags Per Million
Pig:57.7 nTPM
Mouse:43.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030200
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 194.6
Sample id Sample description nTPM
Hippocampus
nTPM: 186.8
2529 Female, age 94, left hemisphere 198.2
2148 Female, age 91, left hemisphere 187.8
1911 Female, age 85, right hemisphere 187.7
1898 Male, age 80, left hemisphere 184.7
2621 Female, age 67, right hemisphere 181.2
1855 Male, age 76, left hemisphere 181.0
Dentate gyrus
nTPM: 182.9
2010 Male, age 76, both hemispheres 188.6
2530 Female, age 94, left hemisphere 187.8
2246 Female, age 85, both hemispheres 184.7
2528 Male, age 74, both hemispheres 183.3
2531 Female, age 67, both hemispheres 181.4
1927 Female, age 91, both hemispheres 171.5
Entorhinal gyrus
nTPM: 185.7
2686 Male, age 75, right hemisphere 210.7
2117 Female, age 91, right hemisphere 199.4
2613 Female, age 94, left hemisphere 181.0
2764 Male, age 80, right hemisphere 178.8
1938 Female, age 85, left hemisphere 177.0
1787 Male, age 76, left hemisphere 167.3
Hippocampus, CA1
nTPM: 186.7
2527 Male, age 74, both hemispheres 191.9
1873 Female, age 85, both hemispheres 189.5
2749 Male, age 80, left hemisphere 186.1
2045 Male, age 76, both hemispheres 184.5
2082 Female, age 91, right hemisphere 181.3
Hippocampus, CA2
nTPM: 182.3
1963 Male, age 80, left hemisphere 192.8
2249 Male, age 74, both hemispheres 186.5
1892 Male, age 76, both hemispheres 184.8
2113 Female, age 91, right hemisphere 179.7
1940 Female, age 85, left hemisphere 177.7
2437 Female, age 94, left hemisphere 172.1
Hippocampus, CA3
nTPM: 180.0
1891 Female, age 85, both hemispheres 195.9
1867 Male, age 76, both hemispheres 192.7
2137 Male, age 80, left hemisphere 182.6
2620 Female, age 94, left hemisphere 182.1
2861 Female, age 67, both hemispheres 167.7
2436 Male, age 74, both hemispheres 159.0
Parahippocampal cortex
nTPM: 180.0
2692 Male, age 74, both hemispheres 217.3
1850 Male, age 80, both hemispheres 191.2
2532 Female, age 72, left hemisphere 185.2
2622 Female, age 67, right hemisphere 182.4
1933 Female, age 85, both hemispheres 177.1
2018 Male, age 76, both hemispheres 174.3
2245 Female, age 91, both hemispheres 172.9
2693 Female, age 94, both hemispheres 170.3
1990 Female, age 91, right hemisphere 168.3
2250 Female, age 67, right hemisphere 161.4
Perirhinal gyrus
nTPM: 168.3
1794 Male, age 80, right hemisphere 174.7
2848 Male, age 76, right hemisphere 171.1
1841 Female, age 85, right hemisphere 169.8
2521 Female, age 94, right hemisphere 168.6
1847 Female, age 91, left hemisphere 157.2
Subiculum
nTPM: 194.6
1901 Male, age 80, both hemispheres 209.7
2438 Female, age 94, left hemisphere 202.6
2619 Male, age 74, both hemispheres 194.2
2042 Male, age 76, both hemispheres 192.7
1977 Female, age 85, both hemispheres 185.0
2729 Female, age 91, right hemisphere 183.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 181.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 181.9
Samples: 197

Max nTPM: 359.7
Min nTPM: 87.0
Std nTPM: 46.5
Median nTPM: 168.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 359.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 326.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 317.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 309.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 308.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 305.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 299.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 297.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 288.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 274.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 270.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 324.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 324.9
FF:10169-103B7 60 years, female 332.7
FF:10153-102I9 76 years, female 317.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.7
Samples: 4

Max nTPM: 71.8
Min nTPM: 43.3
Sample A Female 60.3
Sample B Female 55.4
Sample C Male 71.8
Sample D Male 43.3
Entorhinal cortex
nTPM: 50.7
Samples: 4

Max nTPM: 51.6
Min nTPM: 50.2
Sample A Female 51.6
Sample B Female 50.3
Sample C Male 50.7
Sample D Male 50.2
Subiculum
nTPM: 51.1
Samples: 4

Max nTPM: 57.6
Min nTPM: 46.0
Sample A Female 57.6
Sample B Female 47.2
Sample C Male 53.5
Sample D Male 46.0
Ventral hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 63.6
Min nTPM: 46.9
Sample A Female 53.7
Sample B Female 46.9
Sample C Male 63.6
Sample D Male 60.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 50.6
Min nTPM: 38.5
Sample A Male 45.0
Sample B Male 38.5
Sample C Female 38.5
Sample D Female 50.6
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 46.9
Min nTPM: 22.9
Sample A Male 22.9
Sample B Male 39.5
Sample C Female 46.9
Sample D Female 28.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70238943 Antisense, RP_050526_04_E02, Mouse strain C57BL/6J (56 days, male) 0.4
73834445 Antisense, RP_051212_03_H11, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.