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BAG3
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  • BAG3
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Medium
Purkinje cells - cytoplasm/membrane: High
Purkinje cells - dendrites: High
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Low
White matter cells - nucleus: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:96.9 nTPM
HPA:96.9 nTPM
GTEx:63.9 nTPM
FANTOM5:146.2 Scaled Tags Per Million
Pig:5.3 nTPM
Mouse:7.9 nTPM
Allen mouse:3.1 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA018493Antibody HPA020586
Bergmann glia - cytoplasm/membrane -Not detected
Bergmann glia - nucleus -Not detected
GLUC cells - cytoplasm/membrane -Not detected
GLUC cells - nucleus -Not detected
Purkinje cells High-
Purkinje cells - cytoplasm/membrane -High
Purkinje cells - dendrites -High
Purkinje cells - nucleus -Not detected
Cells in granular layer Medium-
Cells in molecular layer Low-
Granular cells - cytoplasm/membrane -Not detected
Granular cells - nucleus -Not detected
Molecular layer - neuropil -Low
Molecular layer cells - cytoplasm/membrane -Not detected
Molecular layer cells - nucleus -Not detected
Processes in granular layer -Not detected
Processes in molecular layer -Not detected
Processes in white matter -Medium
Synaptic glomeruli - capsule -Not detected
Synaptic glomeruli - core -Not detected
White matter cells - cytoplasm/membrane -Low
White matter cells - nucleus -Not detected



CEREBELLUM - HPA Brain RNA-seq
Max nTPM 96.9
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 90.1
1769 Male, age 76, right hemisphere 181.3
1768 Female, age 72, unknown 103.9
2101 Male, age 74, right hemisphere 88.0
1774 Male, age 80, left hemisphere 82.2
2003 Female, age 85, right hemisphere 76.2
1788 Male, age 55, unknown 65.3
2055 Female, age 91, right hemisphere 64.1
2006 Male, age 61, right hemisphere 60.1
Cerebellar nuclei
nTPM: 84.5
2175 Male, age 61, right hemisphere 139.1
2783 Female, age 72, unknown 97.9
2177 Female, age 85, both hemispheres 86.2
1966 Female, age 91, left hemisphere 76.1
1871 Male, age 74, unknown 75.5
1879 Male, age 55, unknown 74.7
2005 Male, age 80, left hemisphere 74.6
2318 Male, age 74, left hemisphere 71.6
2882 Male, age 76, left hemisphere 65.2
Flocculonodular lobe
nTPM: 96.9
1767 Male, age 76, left hemisphere 145.4
2004 Male, age 61, right hemisphere 119.0
1765 Male, age 55, unknown 101.3
1792 Male, age 74, unknown 84.1
1835 Female, age 85, right hemisphere 82.9
1771 Male, age 80, left hemisphere 82.8
2176 Female, age 91, right hemisphere 63.0
Vermis
nTPM: 89.7
1770 Male, age 76, left hemisphere 141.3
1766 Male, age 55, unknown 108.5
1751 Male, age 74, right hemisphere 98.2
1988 Female, age 85, left hemisphere 87.2
1778 Female, age 91, left hemisphere 81.6
2834 Male, age 80, left hemisphere 81.5
2460 Male, age 61, both hemispheres 72.9
1928 Female, age 72, unknown 69.3
1825 Male, age 74, unknown 67.0

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 63.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 53.8
Samples: 215

Max nTPM: 535.3
Min nTPM: 11.5
Std nTPM: 59.7
Median nTPM: 41.1
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 535.3
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 462.8
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 405.7
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 247.0
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 218.7
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 202.3
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 189.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 185.5
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 175.1
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 160.5
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 139.8
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 125.1
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 124.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 115.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 110.2
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 108.4
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 91.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 79.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 73.4
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 72.8
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 70.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 69.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 69.1
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 68.4
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 64.9
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 63.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 62.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 60.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 60.3
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 60.1
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 59.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 59.0
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 58.8
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 57.9
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 57.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 56.9
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 56.5
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 56.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 56.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 54.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 54.8
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 54.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 54.1
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 53.7
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 53.5
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 53.4
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 53.2
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 53.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 53.0
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 51.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 51.8
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 51.5
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 51.5
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 51.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 51.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 50.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 50.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 49.8
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 49.6
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 49.2
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 48.7
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 48.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 48.0
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 47.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 47.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 47.5
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 47.0
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 46.9
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 46.9
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 46.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 46.8
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 46.7
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 46.7
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 46.5
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 46.2
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 46.1
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 46.0
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 46.0
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 45.7
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 45.5
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 45.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 45.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 45.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 44.7
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 44.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 44.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 44.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 44.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 44.0
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 43.9
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 43.5
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 43.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 43.3
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 43.3
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 43.0
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 43.0
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 43.0
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 42.7
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 42.6
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 42.4
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 42.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 41.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 41.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 41.8
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 41.6
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 41.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 41.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 41.1
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 41.1
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 41.0
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 41.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 40.9
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 40.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 40.0
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 40.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 39.8
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 39.6
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 39.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 39.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 38.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 38.9
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 38.8
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 38.7
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 38.0
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 38.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 37.9
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 37.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 37.6
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 37.5
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 37.4
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 37.4
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 37.2
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 37.2
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 36.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 36.8
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 36.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 36.0
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 36.0
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 35.9
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 35.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 35.7
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 35.5
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 35.4
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 35.3
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 35.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 35.3
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 34.9
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 34.6
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 34.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 34.1
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 34.1
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 34.1
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 34.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 33.7
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 33.6
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 33.3
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 32.8
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 32.8
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 32.7
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 32.6
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 32.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 32.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 32.3
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 32.0
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 32.0
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 32.0
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 31.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 31.8
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 31.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 31.7
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 31.6
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 31.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 31.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 31.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 30.8
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 30.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 30.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 30.4
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 28.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 28.7
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 28.5
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 28.2
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 27.9
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 26.5
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 26.4
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 26.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 26.1
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 26.0
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 25.8
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 25.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 25.5
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 25.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 23.9
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 23.8
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 23.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 23.2
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 23.1
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 22.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 22.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 22.7
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 22.5
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 22.4
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 22.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 21.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 21.9
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 21.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 20.7
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 19.8
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 19.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 19.1
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 18.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 17.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 16.7
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 14.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 11.5
Show allShow less
Brain - Cerebellum
Average nTPM: 63.9
Samples: 241

Max nTPM: 545.3
Min nTPM: 19.2
Std nTPM: 61.7
Median nTPM: 49.2
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 545.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 518.2
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 431.7
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 414.0
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 317.6
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 180.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 167.7
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 156.8
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 152.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 150.1
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 148.6
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 129.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 129.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 122.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 120.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 117.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 113.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 112.0
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 107.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 102.4
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 100.4
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 99.8
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 97.9
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 96.1
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 90.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 80.4
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 79.8
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 76.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 76.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 74.4
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 73.9
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 73.6
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 73.6
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 73.0
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 71.6
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 70.1
GTEX-11ONC-3026-SM-5985W 60-69 years, male 70.0
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 69.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 68.7
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 68.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 68.0
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 66.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 66.2
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 66.1
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 65.6
GTEX-17HII-2926-SM-79OMK 50-59 years, male 65.3
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 64.5
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 64.2
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 64.0
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 63.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 62.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 62.6
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 62.3
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 61.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 61.1
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 60.8
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 60.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 60.5
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 60.4
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 60.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 59.4
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 59.3
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 58.8
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 58.7
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 58.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 58.1
GTEX-145LS-3026-SM-5O99S 60-69 years, female 58.0
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 58.0
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 56.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 56.4
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 56.2
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 55.9
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 55.9
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 55.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 55.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 55.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 55.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 55.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 55.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 55.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 55.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 55.1
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 55.0
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 54.9
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 54.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 54.6
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 54.5
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 54.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 54.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 53.9
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 53.9
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 53.4
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 53.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 53.2
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 52.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 52.2
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 52.1
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 52.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 51.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 51.9
GTEX-17EVP-2926-SM-793BU 40-49 years, male 51.8
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 51.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 51.6
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 51.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 51.4
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 51.4
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 51.3
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 50.9
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 50.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 50.4
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 50.3
GTEX-12126-0926-SM-5FQTW 20-29 years, male 49.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 49.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 49.9
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 49.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 49.7
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 49.6
GTEX-11EI6-2926-SM-5985U 60-69 years, male 49.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 49.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 49.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 49.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 49.2
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 48.8
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 48.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 48.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 48.4
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 48.3
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 48.3
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 48.2
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 48.2
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 48.2
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 48.1
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 48.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 48.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 47.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 47.7
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 47.7
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 47.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 47.6
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 47.3
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 47.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 47.3
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 47.3
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 47.1
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 47.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 47.1
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 47.0
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 46.9
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 46.8
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 46.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 46.4
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 46.0
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 45.9
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 45.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 45.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 45.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 45.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 45.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 45.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 45.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 45.2
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 45.2
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 45.0
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 45.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 44.9
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 44.9
GTEX-14PN4-3026-SM-664O4 50-59 years, male 44.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 44.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 44.3
GTEX-WL46-2826-SM-3LK81 50-59 years, male 44.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 44.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 44.0
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 43.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 43.9
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 43.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 43.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 43.3
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 43.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 42.9
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 42.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 42.8
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 42.8
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 42.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 42.7
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 42.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 42.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 42.5
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 42.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 42.3
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 42.3
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 42.1
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 42.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 42.0
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 41.9
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 41.8
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 41.7
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 41.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 41.5
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 41.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 41.2
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 41.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 40.9
GTEX-1B933-3026-SM-731DB 50-59 years, female 40.9
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 40.9
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 40.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 40.6
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 40.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 40.5
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 40.4
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 40.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 40.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 40.1
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 39.9
GTEX-11DYG-2926-SM-5H132 60-69 years, male 39.7
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 39.7
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 39.7
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 39.6
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 39.5
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 39.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 39.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 38.3
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 38.1
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 37.7
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 37.4
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 37.2
GTEX-14E6D-2926-SM-664OP 50-59 years, male 36.0
GTEX-13112-2926-SM-5DUWT 50-59 years, male 34.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 33.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 32.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 32.5
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 31.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 31.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 31.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 30.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 30.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 29.8
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 29.8
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 26.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 26.2
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 25.2
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 19.2
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 146.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 146.2
FF:10166-103B4 76 years, female 197.7
FF:10083-102B2 22-68 years, mixed 94.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 5.3
Pig sample Sample description nTPM
Cerebellum
nTPM: 5.3
Samples: 4

Max nTPM: 9.6
Min nTPM: 2.8
Sample A Female 9.6
Sample B Female 4.4
Sample C Male 2.8
Sample D Male 4.3

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 7.9
Mouse sample Sample description nTPM
Cerebellum
nTPM: 7.9
Samples: 4

Max nTPM: 8.7
Min nTPM: 6.4
Sample A Male 8.7
Sample B Male 8.6
Sample C Female 6.4
Sample D Female 7.8

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 3.1
69528058 Antisense, RP_050421_03_A06, Mouse strain C57BL/6J (56 days, male) 3.1

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