COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Not detected
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:54.2 nTPM
HPA:33.1 nTPM
GTEx:54.2 nTPM
FANTOM5:84.2 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA043778Antibody HPA061659
Endothelial cells LowNot detected
Glandular cells LowNot detected
Peripheral nerve/ganglion LowNot detected




COLON - HPA RNA-seqi
Average nTPM 33.1
overview
Male, age 54 		Colon sample 67
nTPM: 38.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 34.9
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 34
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 33.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 23.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 30.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 31.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 39.5
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 33.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 35.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 33.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 34.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 28
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 54.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 54.2
Samples: 373

Max nTPM: 106.0
Min nTPM: 22.4
Std nTPM: 14.5
Median nTPM: 53.0
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 106.0
GTEX-14PK6-1826-SM-69LOM 70-79 years, female 89.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 89.4
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 85.5
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 83.5
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 82.9
GTEX-1B8KE-1526-SM-7DUG2 50-59 years, male 82.8
GTEX-1GL5R-1726-SM-9KNUX 50-59 years, male 81.6
GTEX-1HCUA-1926-SM-B2LWE 50-59 years, female 81.6
GTEX-1LG7Z-1326-SM-DIPF3 30-39 years, male 81.4
GTEX-1L5NE-1926-SM-D3L9R 50-59 years, male 81.2
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Colon - Transverse
Average nTPM: 42.5
Samples: 406

Max nTPM: 85.7
Min nTPM: 18.8
Std nTPM: 12.1
Median nTPM: 40.2
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 85.7
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 82.5
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 78.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 78.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 76.4
GTEX-1QW4Y-1326-SM-EWRMZ 30-39 years, male 75.7
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 75.5
GTEX-14H4A-1926-SM-5ZZWN 40-49 years, female 75.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 74.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 73.9
GTEX-1C64O-2326-SM-73KU8 60-69 years, male 73.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 84.2
FF:10014-101C5 62,83,84 years, mixed 84.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.