HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:48.0 nTPM
HPA:48.0 nTPM
GTEx:48.3 nTPM
FANTOM5:69.7 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:16.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.0
Sample id Sample description nTPM
Hippocampus
nTPM: 44.8
1911 Female, age 85, right hemisphere 49.8
2529 Female, age 94, left hemisphere 46.8
2621 Female, age 67, right hemisphere 46.8
1855 Male, age 76, left hemisphere 46.1
1898 Male, age 80, left hemisphere 39.9
2148 Female, age 91, left hemisphere 39.3
Dentate gyrus
nTPM: 41.1
2010 Male, age 76, both hemispheres 52.7
2528 Male, age 74, both hemispheres 44.7
2246 Female, age 85, both hemispheres 42.3
2530 Female, age 94, left hemisphere 41.7
1927 Female, age 91, both hemispheres 33.9
2531 Female, age 67, both hemispheres 31.2
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 54.7
1787 Male, age 76, left hemisphere 42.0
1938 Female, age 85, left hemisphere 38.6
2686 Male, age 75, right hemisphere 33.0
2764 Male, age 80, right hemisphere 32.1
2613 Female, age 94, left hemisphere 27.0
Hippocampus, CA1
nTPM: 39.8
2082 Female, age 91, right hemisphere 44.9
2527 Male, age 74, both hemispheres 44.3
2045 Male, age 76, both hemispheres 41.5
1873 Female, age 85, both hemispheres 40.6
2749 Male, age 80, left hemisphere 27.8
Hippocampus, CA2
nTPM: 45.1
2249 Male, age 74, both hemispheres 59.0
1940 Female, age 85, left hemisphere 51.4
2113 Female, age 91, right hemisphere 46.5
1963 Male, age 80, left hemisphere 41.2
2437 Female, age 94, left hemisphere 39.3
1892 Male, age 76, both hemispheres 33.1
Hippocampus, CA3
nTPM: 39.9
1891 Female, age 85, both hemispheres 54.0
2436 Male, age 74, both hemispheres 50.6
1867 Male, age 76, both hemispheres 41.0
2620 Female, age 94, left hemisphere 32.9
2861 Female, age 67, both hemispheres 32.7
2137 Male, age 80, left hemisphere 28.0
Parahippocampal cortex
nTPM: 38.8
2018 Male, age 76, both hemispheres 51.3
2532 Female, age 72, left hemisphere 41.9
2692 Male, age 74, both hemispheres 40.0
1850 Male, age 80, both hemispheres 39.1
1990 Female, age 91, right hemisphere 38.4
1933 Female, age 85, both hemispheres 37.4
2250 Female, age 67, right hemisphere 36.9
2245 Female, age 91, both hemispheres 36.0
2622 Female, age 67, right hemisphere 33.9
2693 Female, age 94, both hemispheres 32.8
Perirhinal gyrus
nTPM: 33.5
1841 Female, age 85, right hemisphere 36.4
1847 Female, age 91, left hemisphere 35.2
2848 Male, age 76, right hemisphere 32.8
2521 Female, age 94, right hemisphere 32.2
1794 Male, age 80, right hemisphere 30.8
Subiculum
nTPM: 48.0
2042 Male, age 76, both hemispheres 57.9
2438 Female, age 94, left hemisphere 54.1
2619 Male, age 74, both hemispheres 49.7
1901 Male, age 80, both hemispheres 42.9
1977 Female, age 85, both hemispheres 41.8
2729 Female, age 91, right hemisphere 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.3
Samples: 197

Max nTPM: 141.1
Min nTPM: 12.7
Std nTPM: 22.8
Median nTPM: 42.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 141.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 137.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 113.8
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 107.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 106.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 102.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 97.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 97.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 97.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 95.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 88.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.7
FF:10153-102I9 76 years, female 89.2
FF:10169-103B7 60 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 24.4
Min nTPM: 9.4
Sample A Female 22.6
Sample B Female 15.3
Sample C Male 24.4
Sample D Male 9.4
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 12.6
Min nTPM: 9.7
Sample A Female 12.0
Sample B Female 9.7
Sample C Male 12.6
Sample D Male 12.1
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 15.1
Sample A Female 15.2
Sample B Female 15.1
Sample C Male 15.6
Sample D Male 18.8
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 17.4
Min nTPM: 13.1
Sample A Female 17.4
Sample B Female 13.1
Sample C Male 15.6
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.2
Sample A Male 13.6
Sample B Male 10.7
Sample C Female 11.7
Sample D Female 10.2
Hippocampal formation
nTPM: 16.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.7
Sample A Male 13.7
Sample B Male 15.0
Sample C Female 19.0
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68080674 Antisense, RP_040929_01_D04, Mouse strain C57BL/6J (56 days, male) 0.1

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