HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:16.3 nTPM
FANTOM5:59.3 Scaled Tags Per Million
Pig:18.1 nTPM
Mouse:19.6 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018331
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 19.2
1855 Male, age 76, left hemisphere 18.0
1911 Female, age 85, right hemisphere 18.0
2621 Female, age 67, right hemisphere 17.8
2529 Female, age 94, left hemisphere 17.2
2148 Female, age 91, left hemisphere 17.0
Dentate gyrus
nTPM: 18.2
2531 Female, age 67, both hemispheres 19.0
1927 Female, age 91, both hemispheres 18.6
2528 Male, age 74, both hemispheres 18.5
2010 Male, age 76, both hemispheres 18.4
2246 Female, age 85, both hemispheres 18.2
2530 Female, age 94, left hemisphere 16.7
Entorhinal gyrus
nTPM: 17.6
2117 Female, age 91, right hemisphere 18.4
2686 Male, age 75, right hemisphere 17.7
2613 Female, age 94, left hemisphere 17.6
1938 Female, age 85, left hemisphere 17.5
1787 Male, age 76, left hemisphere 17.3
2764 Male, age 80, right hemisphere 17.2
Hippocampus, CA1
nTPM: 18.3
2045 Male, age 76, both hemispheres 19.2
1873 Female, age 85, both hemispheres 18.5
2749 Male, age 80, left hemisphere 18.4
2527 Male, age 74, both hemispheres 18.2
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 17.9
2249 Male, age 74, both hemispheres 19.1
1892 Male, age 76, both hemispheres 18.7
1963 Male, age 80, left hemisphere 18.3
1940 Female, age 85, left hemisphere 17.5
2113 Female, age 91, right hemisphere 17.5
2437 Female, age 94, left hemisphere 16.4
Hippocampus, CA3
nTPM: 17.9
1891 Female, age 85, both hemispheres 18.3
2620 Female, age 94, left hemisphere 18.3
1867 Male, age 76, both hemispheres 18.2
2436 Male, age 74, both hemispheres 18.0
2137 Male, age 80, left hemisphere 17.9
2861 Female, age 67, both hemispheres 16.6
Parahippocampal cortex
nTPM: 18.1
2693 Female, age 94, both hemispheres 18.9
2018 Male, age 76, both hemispheres 18.8
2250 Female, age 67, right hemisphere 18.8
1850 Male, age 80, both hemispheres 18.6
1933 Female, age 85, both hemispheres 18.6
2692 Male, age 74, both hemispheres 18.0
1990 Female, age 91, right hemisphere 17.7
2622 Female, age 67, right hemisphere 17.5
2245 Female, age 91, both hemispheres 17.2
2532 Female, age 72, left hemisphere 17.0
Perirhinal gyrus
nTPM: 18.3
1841 Female, age 85, right hemisphere 19.0
1794 Male, age 80, right hemisphere 18.6
2521 Female, age 94, right hemisphere 18.4
1847 Female, age 91, left hemisphere 18.1
2848 Male, age 76, right hemisphere 17.7
Subiculum
nTPM: 18.1
2438 Female, age 94, left hemisphere 19.0
1977 Female, age 85, both hemispheres 18.5
1901 Male, age 80, both hemispheres 18.1
2729 Female, age 91, right hemisphere 18.0
2619 Male, age 74, both hemispheres 17.8
2042 Male, age 76, both hemispheres 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 44.5
Min nTPM: 11.4
Std nTPM: 3.4
Median nTPM: 15.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 26.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 25.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 25.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.4
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 24.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.7
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 22.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 22.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 21.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 21.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 59.3
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 44.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 16.6
Sample A Female 20.9
Sample B Female 16.7
Sample C Male 16.6
Sample D Male 18.0
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 19.3
Min nTPM: 15.3
Sample A Female 15.7
Sample B Female 19.3
Sample C Male 15.7
Sample D Male 15.3
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 18.5
Min nTPM: 15.1
Sample A Female 18.3
Sample B Female 16.1
Sample C Male 15.1
Sample D Male 18.5
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.4
Sample A Female 17.4
Sample B Female 15.4
Sample C Male 15.6
Sample D Male 20.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 19.5
Min nTPM: 16.8
Sample A Male 16.8
Sample B Male 18.3
Sample C Female 19.5
Sample D Female 18.4
Hippocampal formation
nTPM: 19.6
Samples: 4

Max nTPM: 21.2
Min nTPM: 18.7
Sample A Male 21.2
Sample B Male 18.7
Sample C Female 19.5
Sample D Female 18.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
674 Antisense, RP_Baylor_253938, Mouse strain C57BL/6J (56 days, male) 3.3
673 Antisense, RP_Baylor_253938, Mouse strain C57BL/6J (56 days, male) 2.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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