COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: High
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:66.9 nTPM
HPA:66.9 nTPM
GTEx:45.8 nTPM
FANTOM5:57.9 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA056179Antibody HPA061345
Endothelial cells LowHigh
Glandular cells HighHigh



COLON - HPA RNA-seqi
Average nTPM 66.9
overview
Male, age 54 		Colon sample 67
nTPM: 64.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 53.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 62.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 79.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 81.3
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 84.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 72.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 63.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 58.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 76
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 63.4
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 59.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 51
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 45.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 45.8
Samples: 373

Max nTPM: 136.5
Min nTPM: 15.1
Std nTPM: 12.5
Median nTPM: 43.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 136.5
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 84.0
GTEX-1PIIG-2126-SM-EXUSD 30-39 years, male 82.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 81.9
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 81.4
GTEX-1OFPY-1226-SM-E76OM 60-69 years, male 79.1
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 78.2
GTEX-15G1A-1926-SM-7KUFF 30-39 years, male 77.8
GTEX-17F96-2126-SM-7KFSM 70-79 years, male 73.3
GTEX-183WM-2526-SM-731BP 70-79 years, female 71.9
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 71.8
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Colon - Transverse
Average nTPM: 41.6
Samples: 406

Max nTPM: 100.9
Min nTPM: 19.4
Std nTPM: 10.7
Median nTPM: 40.7
GTEX-1ICLZ-2426-SM-CKZOD 60-69 years, male 100.9
GTEX-1LVAN-2526-SM-CNPPC 50-59 years, female 94.6
GTEX-1OKEX-1226-SM-DTXEC 60-69 years, male 84.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 78.8
GTEX-1HSMP-2326-SM-D3L8R 70-79 years, male 71.9
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 71.5
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 68.5
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 67.0
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 66.0
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 65.6
GTEX-1J1R8-1126-SM-CNPQ3 40-49 years, male 64.5
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 57.9
FF:10014-101C5 62,83,84 years, mixed 57.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.