HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:16.1 nTPM
HPA:16.1 nTPM
GTEx:12.7 nTPM
FANTOM5:15.8 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:21.0 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.1
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1911 Female, age 85, right hemisphere 16.2
1898 Male, age 80, left hemisphere 15.7
2529 Female, age 94, left hemisphere 15.6
2621 Female, age 67, right hemisphere 15.5
2148 Female, age 91, left hemisphere 14.6
1855 Male, age 76, left hemisphere 14.5
Dentate gyrus
nTPM: 15.4
2246 Female, age 85, both hemispheres 16.2
2531 Female, age 67, both hemispheres 15.8
1927 Female, age 91, both hemispheres 15.6
2010 Male, age 76, both hemispheres 15.3
2528 Male, age 74, both hemispheres 15.3
2530 Female, age 94, left hemisphere 14.2
Entorhinal gyrus
nTPM: 14.9
2117 Female, age 91, right hemisphere 15.7
1787 Male, age 76, left hemisphere 15.3
2613 Female, age 94, left hemisphere 15.0
2764 Male, age 80, right hemisphere 14.9
1938 Female, age 85, left hemisphere 14.8
2686 Male, age 75, right hemisphere 13.5
Hippocampus, CA1
nTPM: 16.0
2527 Male, age 74, both hemispheres 16.9
1873 Female, age 85, both hemispheres 16.1
2045 Male, age 76, both hemispheres 16.1
2082 Female, age 91, right hemisphere 15.7
2749 Male, age 80, left hemisphere 15.1
Hippocampus, CA2
nTPM: 15.5
2249 Male, age 74, both hemispheres 16.9
1892 Male, age 76, both hemispheres 16.1
2113 Female, age 91, right hemisphere 15.6
1940 Female, age 85, left hemisphere 15.4
1963 Male, age 80, left hemisphere 14.6
2437 Female, age 94, left hemisphere 14.6
Hippocampus, CA3
nTPM: 16.1
2436 Male, age 74, both hemispheres 17.5
1867 Male, age 76, both hemispheres 16.8
1891 Female, age 85, both hemispheres 16.2
2620 Female, age 94, left hemisphere 16.2
2137 Male, age 80, left hemisphere 16.0
2861 Female, age 67, both hemispheres 14.2
Parahippocampal cortex
nTPM: 16.0
2018 Male, age 76, both hemispheres 17.0
2692 Male, age 74, both hemispheres 16.8
1850 Male, age 80, both hemispheres 16.4
2693 Female, age 94, both hemispheres 16.3
1933 Female, age 85, both hemispheres 16.1
1990 Female, age 91, right hemisphere 16.1
2622 Female, age 67, right hemisphere 15.8
2250 Female, age 67, right hemisphere 15.6
2532 Female, age 72, left hemisphere 15.1
2245 Female, age 91, both hemispheres 15.0
Perirhinal gyrus
nTPM: 15.7
1847 Female, age 91, left hemisphere 16.7
1841 Female, age 85, right hemisphere 16.4
1794 Male, age 80, right hemisphere 15.4
2521 Female, age 94, right hemisphere 15.1
2848 Male, age 76, right hemisphere 14.6
Subiculum
nTPM: 15.7
1901 Male, age 80, both hemispheres 16.3
2619 Male, age 74, both hemispheres 16.2
1977 Female, age 85, both hemispheres 15.6
2729 Female, age 91, right hemisphere 15.6
2438 Female, age 94, left hemisphere 15.4
2042 Male, age 76, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.7
Samples: 197

Max nTPM: 22.6
Min nTPM: 7.6
Std nTPM: 2.5
Median nTPM: 12.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 22.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 21.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 18.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 18.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 18.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 17.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 17.6
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 17.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 17.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 17.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 17.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.8
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 11.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 39.0
Min nTPM: 27.4
Sample A Female 39.0
Sample B Female 32.1
Sample C Male 35.7
Sample D Male 27.4
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 43.1
Min nTPM: 28.5
Sample A Female 34.2
Sample B Female 43.1
Sample C Male 36.0
Sample D Male 28.5
Subiculum
nTPM: 32.1
Samples: 4

Max nTPM: 41.2
Min nTPM: 28.2
Sample A Female 41.2
Sample B Female 30.5
Sample C Male 28.2
Sample D Male 28.5
Ventral hippocampus
nTPM: 30.8
Samples: 4

Max nTPM: 33.2
Min nTPM: 29.0
Sample A Female 33.2
Sample B Female 29.0
Sample C Male 31.2
Sample D Male 29.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 21.4
Min nTPM: 16.1
Sample A Male 19.7
Sample B Male 21.2
Sample C Female 21.4
Sample D Female 16.1
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 24.0
Min nTPM: 18.1
Sample A Male 24.0
Sample B Male 21.0
Sample C Female 18.1
Sample D Female 21.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
74357595 Antisense, RP_060117_01_A10, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

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