HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:57.8 nTPM
HPA:57.8 nTPM
GTEx:67.5 nTPM
FANTOM5:210.3 Scaled Tags Per Million
Pig:86.6 nTPM
Mouse:132.5 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038118Antibody HPA042122Antibody HPA042770
Glial cells Not detectedNot detectedNot detected
Neuronal cells MediumHighNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.6
2529 Female, age 94, left hemisphere 58.1
1898 Male, age 80, left hemisphere 51.9
1911 Female, age 85, right hemisphere 47.8
1855 Male, age 76, left hemisphere 46.6
2148 Female, age 91, left hemisphere 44.3
2621 Female, age 67, right hemisphere 42.7
Dentate gyrus
nTPM: 44.5
2528 Male, age 74, both hemispheres 52.0
2246 Female, age 85, both hemispheres 48.2
1927 Female, age 91, both hemispheres 47.3
2010 Male, age 76, both hemispheres 43.3
2530 Female, age 94, left hemisphere 39.6
2531 Female, age 67, both hemispheres 36.8
Entorhinal gyrus
nTPM: 56.5
2117 Female, age 91, right hemisphere 63.5
2764 Male, age 80, right hemisphere 61.8
1938 Female, age 85, left hemisphere 59.4
1787 Male, age 76, left hemisphere 54.0
2613 Female, age 94, left hemisphere 51.7
2686 Male, age 75, right hemisphere 48.5
Hippocampus, CA1
nTPM: 49.5
2749 Male, age 80, left hemisphere 58.2
2527 Male, age 74, both hemispheres 57.8
2082 Female, age 91, right hemisphere 47.8
1873 Female, age 85, both hemispheres 46.0
2045 Male, age 76, both hemispheres 37.4
Hippocampus, CA2
nTPM: 48.0
2113 Female, age 91, right hemisphere 54.3
1963 Male, age 80, left hemisphere 53.9
1940 Female, age 85, left hemisphere 48.1
2437 Female, age 94, left hemisphere 45.1
2249 Male, age 74, both hemispheres 44.8
1892 Male, age 76, both hemispheres 41.8
Hippocampus, CA3
nTPM: 47.7
2137 Male, age 80, left hemisphere 61.9
1891 Female, age 85, both hemispheres 54.8
1867 Male, age 76, both hemispheres 49.4
2620 Female, age 94, left hemisphere 48.3
2436 Male, age 74, both hemispheres 39.1
2861 Female, age 67, both hemispheres 32.4
Parahippocampal cortex
nTPM: 55.3
1850 Male, age 80, both hemispheres 67.4
2692 Male, age 74, both hemispheres 66.4
2532 Female, age 72, left hemisphere 58.3
1990 Female, age 91, right hemisphere 58.0
1933 Female, age 85, both hemispheres 56.3
2018 Male, age 76, both hemispheres 53.3
2245 Female, age 91, both hemispheres 52.3
2693 Female, age 94, both hemispheres 52.2
2250 Female, age 67, right hemisphere 44.5
2622 Female, age 67, right hemisphere 44.0
Perirhinal gyrus
nTPM: 55.8
1794 Male, age 80, right hemisphere 60.8
1847 Female, age 91, left hemisphere 60.3
2521 Female, age 94, right hemisphere 55.7
1841 Female, age 85, right hemisphere 52.3
2848 Male, age 76, right hemisphere 49.8
Subiculum
nTPM: 57.8
2438 Female, age 94, left hemisphere 62.7
1901 Male, age 80, both hemispheres 62.6
2619 Male, age 74, both hemispheres 60.7
1977 Female, age 85, both hemispheres 59.9
2729 Female, age 91, right hemisphere 54.2
2042 Male, age 76, both hemispheres 46.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.5
Samples: 197

Max nTPM: 124.3
Min nTPM: 20.0
Std nTPM: 17.3
Median nTPM: 66.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 122.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 120.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 109.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 106.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 106.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 105.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 103.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 103.3
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 102.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 97.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 210.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 210.3
FF:10153-102I9 76 years, female 254.2
FF:10169-103B7 60 years, female 166.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 86.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 70.5
Samples: 4

Max nTPM: 95.4
Min nTPM: 49.6
Sample A Female 95.4
Sample B Female 67.1
Sample C Male 69.8
Sample D Male 49.6
Entorhinal cortex
nTPM: 86.6
Samples: 4

Max nTPM: 93.5
Min nTPM: 80.8
Sample A Female 86.6
Sample B Female 93.5
Sample C Male 85.4
Sample D Male 80.8
Subiculum
nTPM: 82.2
Samples: 4

Max nTPM: 103.3
Min nTPM: 71.4
Sample A Female 103.3
Sample B Female 78.2
Sample C Male 71.4
Sample D Male 75.8
Ventral hippocampus
nTPM: 65.8
Samples: 4

Max nTPM: 73.5
Min nTPM: 47.4
Sample A Female 73.5
Sample B Female 47.4
Sample C Male 72.1
Sample D Male 70.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.6
Samples: 4

Max nTPM: 158.9
Min nTPM: 118.1
Sample A Male 118.1
Sample B Male 133.2
Sample C Female 120.0
Sample D Female 158.9
Hippocampal formation
nTPM: 102.8
Samples: 4

Max nTPM: 119.7
Min nTPM: 94.0
Sample A Male 119.7
Sample B Male 98.1
Sample C Female 99.4
Sample D Female 94.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
1655 Antisense, RP_040604_01_C08, Mouse strain C57BL/6J (56 days, male) 1.0
1656 Antisense, RP_040604_01_C08, Mouse strain C57BL/6J (56 days, male) 0.3

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