HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:21.9 nTPM
FANTOM5:11.1 Scaled Tags Per Million
Pig:32.9 nTPM
Mouse:4.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.0
2529 Female, age 94, left hemisphere 13.3
2621 Female, age 67, right hemisphere 11.4
2148 Female, age 91, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.8
1855 Male, age 76, left hemisphere 9.9
1898 Male, age 80, left hemisphere 9.8
Dentate gyrus
nTPM: 10.1
2530 Female, age 94, left hemisphere 13.4
2528 Male, age 74, both hemispheres 10.1
2531 Female, age 67, both hemispheres 10.1
2010 Male, age 76, both hemispheres 9.3
2246 Female, age 85, both hemispheres 9.2
1927 Female, age 91, both hemispheres 8.9
Entorhinal gyrus
nTPM: 9.9
2117 Female, age 91, right hemisphere 11.9
2764 Male, age 80, right hemisphere 10.2
2686 Male, age 75, right hemisphere 10.1
2613 Female, age 94, left hemisphere 9.7
1938 Female, age 85, left hemisphere 9.5
1787 Male, age 76, left hemisphere 7.9
Hippocampus, CA1
nTPM: 9.3
2749 Male, age 80, left hemisphere 10.2
2082 Female, age 91, right hemisphere 10.0
2527 Male, age 74, both hemispheres 9.6
1873 Female, age 85, both hemispheres 9.2
2045 Male, age 76, both hemispheres 7.5
Hippocampus, CA2
nTPM: 10.0
2437 Female, age 94, left hemisphere 11.8
1963 Male, age 80, left hemisphere 11.0
2113 Female, age 91, right hemisphere 10.6
2249 Male, age 74, both hemispheres 9.3
1940 Female, age 85, left hemisphere 8.7
1892 Male, age 76, both hemispheres 8.6
Hippocampus, CA3
nTPM: 8.6
2861 Female, age 67, both hemispheres 10.1
1891 Female, age 85, both hemispheres 10.0
1867 Male, age 76, both hemispheres 9.3
2436 Male, age 74, both hemispheres 7.7
2137 Male, age 80, left hemisphere 7.6
2620 Female, age 94, left hemisphere 7.0
Parahippocampal cortex
nTPM: 9.4
2532 Female, age 72, left hemisphere 10.5
2692 Male, age 74, both hemispheres 10.5
2245 Female, age 91, both hemispheres 10.1
1933 Female, age 85, both hemispheres 9.5
1990 Female, age 91, right hemisphere 9.2
2693 Female, age 94, both hemispheres 9.2
2250 Female, age 67, right hemisphere 9.1
2622 Female, age 67, right hemisphere 8.8
2018 Male, age 76, both hemispheres 8.6
1850 Male, age 80, both hemispheres 8.5
Perirhinal gyrus
nTPM: 7.9
2521 Female, age 94, right hemisphere 9.3
1794 Male, age 80, right hemisphere 8.2
1841 Female, age 85, right hemisphere 7.9
1847 Female, age 91, left hemisphere 7.6
2848 Male, age 76, right hemisphere 6.2
Subiculum
nTPM: 11.2
2438 Female, age 94, left hemisphere 15.8
2729 Female, age 91, right hemisphere 11.1
2042 Male, age 76, both hemispheres 10.8
2619 Male, age 74, both hemispheres 10.2
1901 Male, age 80, both hemispheres 9.6
1977 Female, age 85, both hemispheres 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 197

Max nTPM: 59.0
Min nTPM: 1.1
Std nTPM: 11.1
Median nTPM: 20.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 56.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 55.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 55.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 51.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 49.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 47.6
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 43.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 42.9
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 42.2
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 40.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.1
FF:10153-102I9 76 years, female 11.7
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 45.9
Min nTPM: 18.8
Sample A Female 45.9
Sample B Female 27.0
Sample C Male 39.9
Sample D Male 18.8
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 26.1
Min nTPM: 20.2
Sample A Female 20.6
Sample B Female 24.1
Sample C Male 26.1
Sample D Male 20.2
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 35.1
Min nTPM: 22.4
Sample A Female 35.1
Sample B Female 28.3
Sample C Male 24.1
Sample D Male 22.4
Ventral hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 37.0
Min nTPM: 25.8
Sample A Female 33.8
Sample B Female 25.8
Sample C Male 37.0
Sample D Male 32.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 5.0
Min nTPM: 3.1
Sample A Male 4.2
Sample B Male 3.8
Sample C Female 5.0
Sample D Female 3.1
Hippocampal formation
nTPM: 4.6
Samples: 4

Max nTPM: 4.8
Min nTPM: 4.1
Sample A Male 4.8
Sample B Male 4.1
Sample C Female 4.6
Sample D Female 4.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70299989 Antisense, RP_050602_03_H01, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.