HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:41.5 nTPM
HPA:41.5 nTPM
GTEx:38.9 nTPM
FANTOM5:7.4 Scaled Tags Per Million
Pig:35.8 nTPM
Mouse:23.9 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023876
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.9
1898 Male, age 80, left hemisphere 40.5
1855 Male, age 76, left hemisphere 39.6
2148 Female, age 91, left hemisphere 39.0
2621 Female, age 67, right hemisphere 38.9
1911 Female, age 85, right hemisphere 38.3
2529 Female, age 94, left hemisphere 36.9
Dentate gyrus
nTPM: 40.6
2530 Female, age 94, left hemisphere 42.1
2010 Male, age 76, both hemispheres 41.5
1927 Female, age 91, both hemispheres 41.0
2528 Male, age 74, both hemispheres 40.1
2531 Female, age 67, both hemispheres 39.8
2246 Female, age 85, both hemispheres 39.1
Entorhinal gyrus
nTPM: 40.5
2613 Female, age 94, left hemisphere 42.6
2764 Male, age 80, right hemisphere 42.0
1787 Male, age 76, left hemisphere 40.4
1938 Female, age 85, left hemisphere 40.1
2686 Male, age 75, right hemisphere 39.7
2117 Female, age 91, right hemisphere 38.2
Hippocampus, CA1
nTPM: 40.6
2749 Male, age 80, left hemisphere 46.6
1873 Female, age 85, both hemispheres 39.8
2082 Female, age 91, right hemisphere 38.9
2045 Male, age 76, both hemispheres 38.8
2527 Male, age 74, both hemispheres 38.7
Hippocampus, CA2
nTPM: 41.5
1963 Male, age 80, left hemisphere 44.6
1892 Male, age 76, both hemispheres 43.3
2437 Female, age 94, left hemisphere 41.0
1940 Female, age 85, left hemisphere 40.1
2249 Male, age 74, both hemispheres 40.1
2113 Female, age 91, right hemisphere 39.7
Hippocampus, CA3
nTPM: 40.3
2137 Male, age 80, left hemisphere 43.1
1867 Male, age 76, both hemispheres 41.3
2861 Female, age 67, both hemispheres 40.3
2620 Female, age 94, left hemisphere 39.8
2436 Male, age 74, both hemispheres 38.8
1891 Female, age 85, both hemispheres 38.6
Parahippocampal cortex
nTPM: 40.9
2532 Female, age 72, left hemisphere 42.5
1933 Female, age 85, both hemispheres 42.1
2250 Female, age 67, right hemisphere 42.0
1990 Female, age 91, right hemisphere 41.5
2693 Female, age 94, both hemispheres 41.5
2018 Male, age 76, both hemispheres 40.3
1850 Male, age 80, both hemispheres 40.2
2245 Female, age 91, both hemispheres 39.8
2622 Female, age 67, right hemisphere 39.8
2692 Male, age 74, both hemispheres 39.1
Perirhinal gyrus
nTPM: 41.3
1841 Female, age 85, right hemisphere 42.5
1847 Female, age 91, left hemisphere 41.8
1794 Male, age 80, right hemisphere 41.7
2521 Female, age 94, right hemisphere 41.3
2848 Male, age 76, right hemisphere 39.4
Subiculum
nTPM: 39.1
1977 Female, age 85, both hemispheres 41.7
1901 Male, age 80, both hemispheres 39.9
2619 Male, age 74, both hemispheres 39.9
2729 Female, age 91, right hemisphere 38.1
2042 Male, age 76, both hemispheres 37.8
2438 Female, age 94, left hemisphere 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 91.6
Min nTPM: 15.3
Std nTPM: 13.6
Median nTPM: 36.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 91.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 82.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 78.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 77.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 72.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 70.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 68.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 67.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 63.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 63.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 7.4
FF:10169-103B7 60 years, female 9.4
FF:10153-102I9 76 years, female 5.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.8
Samples: 4

Max nTPM: 56.2
Min nTPM: 18.7
Sample A Female 56.2
Sample B Female 23.7
Sample C Male 28.7
Sample D Male 18.7
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 22.5
Sample A Female 39.6
Sample B Female 33.2
Sample C Male 31.6
Sample D Male 22.5
Subiculum
nTPM: 35.8
Samples: 4

Max nTPM: 66.5
Min nTPM: 23.6
Sample A Female 66.5
Sample B Female 29.2
Sample C Male 23.9
Sample D Male 23.6
Ventral hippocampus
nTPM: 29.5
Samples: 4

Max nTPM: 39.9
Min nTPM: 22.2
Sample A Female 39.9
Sample B Female 22.2
Sample C Male 29.8
Sample D Male 26.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 28.1
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 28.1
Sample C Female 22.2
Sample D Female 22.8
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 26.7
Min nTPM: 19.1
Sample A Male 25.7
Sample B Male 19.1
Sample C Female 24.1
Sample D Female 26.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
275680 Antisense, RP_040609_01_B03, Mouse strain C57BL/6J (56 days, male) 2.2

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