HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:11.7 nTPM
HPA:11.7 nTPM
GTEx:11.5 nTPM
FANTOM5:16.8 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:44.7 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051304
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.7
Sample id Sample description nTPM
Hippocampus
nTPM: 10.6
1898 Male, age 80, left hemisphere 12.0
2148 Female, age 91, left hemisphere 11.7
2621 Female, age 67, right hemisphere 10.6
2529 Female, age 94, left hemisphere 10.0
1855 Male, age 76, left hemisphere 9.8
1911 Female, age 85, right hemisphere 9.4
Dentate gyrus
nTPM: 10.5
2531 Female, age 67, both hemispheres 11.6
1927 Female, age 91, both hemispheres 11.1
2530 Female, age 94, left hemisphere 10.7
2528 Male, age 74, both hemispheres 10.5
2246 Female, age 85, both hemispheres 9.8
2010 Male, age 76, both hemispheres 9.4
Entorhinal gyrus
nTPM: 11.1
2764 Male, age 80, right hemisphere 12.1
2613 Female, age 94, left hemisphere 12.0
2686 Male, age 75, right hemisphere 11.9
1938 Female, age 85, left hemisphere 11.0
1787 Male, age 76, left hemisphere 10.5
2117 Female, age 91, right hemisphere 9.2
Hippocampus, CA1
nTPM: 11.0
2749 Male, age 80, left hemisphere 14.0
1873 Female, age 85, both hemispheres 10.9
2082 Female, age 91, right hemisphere 10.1
2045 Male, age 76, both hemispheres 10.0
2527 Male, age 74, both hemispheres 10.0
Hippocampus, CA2
nTPM: 10.4
1963 Male, age 80, left hemisphere 12.3
1892 Male, age 76, both hemispheres 11.6
2437 Female, age 94, left hemisphere 10.2
1940 Female, age 85, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.6
2249 Male, age 74, both hemispheres 8.7
Hippocampus, CA3
nTPM: 11.1
2861 Female, age 67, both hemispheres 14.2
2137 Male, age 80, left hemisphere 12.6
2620 Female, age 94, left hemisphere 10.6
1867 Male, age 76, both hemispheres 10.3
1891 Female, age 85, both hemispheres 9.5
2436 Male, age 74, both hemispheres 9.5
Parahippocampal cortex
nTPM: 10.9
1850 Male, age 80, both hemispheres 12.5
2622 Female, age 67, right hemisphere 11.8
1933 Female, age 85, both hemispheres 11.4
1990 Female, age 91, right hemisphere 11.0
2245 Female, age 91, both hemispheres 10.9
2532 Female, age 72, left hemisphere 10.7
2693 Female, age 94, both hemispheres 10.7
2250 Female, age 67, right hemisphere 10.6
2692 Male, age 74, both hemispheres 10.5
2018 Male, age 76, both hemispheres 9.2
Perirhinal gyrus
nTPM: 11.7
1794 Male, age 80, right hemisphere 12.2
1847 Female, age 91, left hemisphere 12.2
1841 Female, age 85, right hemisphere 11.8
2521 Female, age 94, right hemisphere 11.6
2848 Male, age 76, right hemisphere 10.9
Subiculum
nTPM: 10.0
1901 Male, age 80, both hemispheres 11.1
1977 Female, age 85, both hemispheres 10.3
2619 Male, age 74, both hemispheres 10.1
2729 Female, age 91, right hemisphere 10.1
2042 Male, age 76, both hemispheres 9.3
2438 Female, age 94, left hemisphere 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 30.0
Min nTPM: 2.8
Std nTPM: 4.9
Median nTPM: 10.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 23.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 22.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 21.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 21.3
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 21.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 21.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.8
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 18.7
Min nTPM: 12.3
Sample A Female 18.5
Sample B Female 18.7
Sample C Male 13.1
Sample D Male 12.3
Entorhinal cortex
nTPM: 17.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 14.8
Sample A Female 16.7
Sample B Female 19.2
Sample C Male 18.5
Sample D Male 14.8
Subiculum
nTPM: 14.0
Samples: 4

Max nTPM: 18.6
Min nTPM: 11.5
Sample A Female 18.6
Sample B Female 12.8
Sample C Male 12.9
Sample D Male 11.5
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.1
Sample A Female 13.5
Sample B Female 12.1
Sample C Male 15.8
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 51.4
Min nTPM: 38.2
Sample A Male 38.2
Sample B Male 43.9
Sample C Female 51.4
Sample D Female 45.4
Hippocampal formation
nTPM: 43.7
Samples: 4

Max nTPM: 51.9
Min nTPM: 37.0
Sample A Male 51.9
Sample B Male 37.0
Sample C Female 39.9
Sample D Female 45.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
74359437 Antisense, RP_051219_04_F07, Mouse strain C57BL/6J (56 days, male) 0.3

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