COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.6 nTPM
HPA:46.6 nTPM
GTEx:26.0 nTPM
FANTOM5:104.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA038624
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Low



COLON - HPA RNA-seqi
Average nTPM 46.6
overview
Male, age 54 		Colon sample 67
nTPM: 46.8
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 53.6
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 45.1
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 52.9
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 39.8
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 26.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 57.3
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 57.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 38.4
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 56.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 50.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 41.7
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 39.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 26.0
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 11.9
Samples: 373

Max nTPM: 52.2
Min nTPM: 7.5
Std nTPM: 5.3
Median nTPM: 10.8
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 52.2
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 50.6
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 42.4
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 36.3
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 35.8
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 35.1
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 34.7
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 34.2
GTEX-15FZZ-1826-SM-6LLJP 30-39 years, female 33.8
GTEX-13W3W-2226-SM-5LU4M 60-69 years, female 32.8
GTEX-13113-1426-SM-5EGHU 60-69 years, female 32.7
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Colon - Transverse
Average nTPM: 26.0
Samples: 406

Max nTPM: 89.6
Min nTPM: 7.7
Std nTPM: 14.7
Median nTPM: 22.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 89.6
GTEX-14JIY-3326-SM-6871E 60-69 years, male 71.1
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 68.1
GTEX-1C475-1626-SM-731FP 40-49 years, female 65.2
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 59.6
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 59.5
GTEX-1B8KE-1926-SM-731EE 50-59 years, male 59.2
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 58.5
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 57.9
GTEX-ZLWG-1726-SM-DNZZ2 50-59 years, female 57.6
GTEX-1399U-1926-SM-5IFH7 50-59 years, female 57.2
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 104.7
FF:10014-101C5 62,83,84 years, mixed 104.7

Contact

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.