HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.9 nTPM
HPA:34.9 nTPM
GTEx:26.4 nTPM
FANTOM5:62.9 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:73.6 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021234Antibody HPA029885
Glial cells MediumNot detected
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.9
Sample id Sample description nTPM
Hippocampus
nTPM: 34.4
1898 Male, age 80, left hemisphere 34.9
2148 Female, age 91, left hemisphere 34.9
2529 Female, age 94, left hemisphere 34.7
1855 Male, age 76, left hemisphere 34.4
2621 Female, age 67, right hemisphere 34.3
1911 Female, age 85, right hemisphere 33.1
Dentate gyrus
nTPM: 34.2
2531 Female, age 67, both hemispheres 34.8
2530 Female, age 94, left hemisphere 34.6
1927 Female, age 91, both hemispheres 34.1
2246 Female, age 85, both hemispheres 34.1
2528 Male, age 74, both hemispheres 33.9
2010 Male, age 76, both hemispheres 33.5
Entorhinal gyrus
nTPM: 34.6
2764 Male, age 80, right hemisphere 35.6
2117 Female, age 91, right hemisphere 35.5
2613 Female, age 94, left hemisphere 34.4
1787 Male, age 76, left hemisphere 34.3
1938 Female, age 85, left hemisphere 34.3
2686 Male, age 75, right hemisphere 33.7
Hippocampus, CA1
nTPM: 34.3
2749 Male, age 80, left hemisphere 35.5
1873 Female, age 85, both hemispheres 34.5
2527 Male, age 74, both hemispheres 34.2
2045 Male, age 76, both hemispheres 33.6
2082 Female, age 91, right hemisphere 33.6
Hippocampus, CA2
nTPM: 34.4
1963 Male, age 80, left hemisphere 35.4
2437 Female, age 94, left hemisphere 35.0
1892 Male, age 76, both hemispheres 34.9
2249 Male, age 74, both hemispheres 34.0
2113 Female, age 91, right hemisphere 33.9
1940 Female, age 85, left hemisphere 33.2
Hippocampus, CA3
nTPM: 34.9
2861 Female, age 67, both hemispheres 36.4
2620 Female, age 94, left hemisphere 35.6
2137 Male, age 80, left hemisphere 34.9
1891 Female, age 85, both hemispheres 34.8
2436 Male, age 74, both hemispheres 34.0
1867 Male, age 76, both hemispheres 33.9
Parahippocampal cortex
nTPM: 34.1
1850 Male, age 80, both hemispheres 35.9
2692 Male, age 74, both hemispheres 34.8
2622 Female, age 67, right hemisphere 34.4
2018 Male, age 76, both hemispheres 34.3
1990 Female, age 91, right hemisphere 34.2
1933 Female, age 85, both hemispheres 34.1
2250 Female, age 67, right hemisphere 34.1
2532 Female, age 72, left hemisphere 33.6
2693 Female, age 94, both hemispheres 33.2
2245 Female, age 91, both hemispheres 32.6
Perirhinal gyrus
nTPM: 34.4
1794 Male, age 80, right hemisphere 36.4
1841 Female, age 85, right hemisphere 34.7
1847 Female, age 91, left hemisphere 34.4
2848 Male, age 76, right hemisphere 34.3
2521 Female, age 94, right hemisphere 32.2
Subiculum
nTPM: 34.1
1977 Female, age 85, both hemispheres 34.8
2729 Female, age 91, right hemisphere 34.5
1901 Male, age 80, both hemispheres 34.4
2619 Male, age 74, both hemispheres 34.0
2438 Female, age 94, left hemisphere 33.7
2042 Male, age 76, both hemispheres 33.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.4
Samples: 197

Max nTPM: 42.3
Min nTPM: 11.2
Std nTPM: 5.3
Median nTPM: 26.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 42.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 38.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 38.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 37.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 37.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 36.5
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 35.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 35.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 35.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 35.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 35.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.9
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 49.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 20.9
Min nTPM: 6.0
Sample A Female 20.9
Sample B Female 11.7
Sample C Male 11.2
Sample D Male 6.0
Entorhinal cortex
nTPM: 9.6
Samples: 4

Max nTPM: 12.0
Min nTPM: 4.9
Sample A Female 12.0
Sample B Female 10.1
Sample C Male 11.2
Sample D Male 4.9
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 17.5
Min nTPM: 5.8
Sample A Female 17.5
Sample B Female 10.2
Sample C Male 8.5
Sample D Male 5.8
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 12.8
Min nTPM: 8.5
Sample A Female 12.6
Sample B Female 8.5
Sample C Male 12.8
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.6
Samples: 4

Max nTPM: 72.0
Min nTPM: 61.6
Sample A Male 62.4
Sample B Male 61.6
Sample C Female 72.0
Sample D Female 66.2
Hippocampal formation
nTPM: 73.7
Samples: 4

Max nTPM: 79.0
Min nTPM: 68.7
Sample A Male 79.0
Sample B Male 68.7
Sample C Female 73.6
Sample D Female 73.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
71654122 Antisense, RP_050927_03_D05, Mouse strain C57BL/6J (56 days, male) 0.9

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