HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:647.3 nTPM
HPA:647.3 nTPM
GTEx:504.2 nTPM
FANTOM5:658.5 Scaled Tags Per Million
Pig:188.1 nTPM
Mouse:308.4 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045617
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 647.3
Sample id Sample description nTPM
Hippocampus
nTPM: 647.3
2148 Female, age 91, left hemisphere 669.8
1855 Male, age 76, left hemisphere 654.6
1911 Female, age 85, right hemisphere 647.7
1898 Male, age 80, left hemisphere 646.8
2529 Female, age 94, left hemisphere 645.2
2621 Female, age 67, right hemisphere 619.7
Dentate gyrus
nTPM: 602.0
2528 Male, age 74, both hemispheres 638.7
2530 Female, age 94, left hemisphere 618.0
2010 Male, age 76, both hemispheres 613.1
2246 Female, age 85, both hemispheres 592.5
1927 Female, age 91, both hemispheres 587.5
2531 Female, age 67, both hemispheres 562.3
Entorhinal gyrus
nTPM: 614.3
2117 Female, age 91, right hemisphere 727.2
2686 Male, age 75, right hemisphere 614.7
2764 Male, age 80, right hemisphere 600.8
1787 Male, age 76, left hemisphere 596.9
1938 Female, age 85, left hemisphere 595.8
2613 Female, age 94, left hemisphere 550.5
Hippocampus, CA1
nTPM: 590.9
1873 Female, age 85, both hemispheres 626.6
2527 Male, age 74, both hemispheres 620.3
2082 Female, age 91, right hemisphere 587.1
2045 Male, age 76, both hemispheres 566.0
2749 Male, age 80, left hemisphere 554.6
Hippocampus, CA2
nTPM: 606.4
2249 Male, age 74, both hemispheres 628.0
1963 Male, age 80, left hemisphere 626.7
1940 Female, age 85, left hemisphere 622.6
2113 Female, age 91, right hemisphere 608.6
2437 Female, age 94, left hemisphere 605.3
1892 Male, age 76, both hemispheres 547.5
Hippocampus, CA3
nTPM: 599.4
1891 Female, age 85, both hemispheres 657.3
2861 Female, age 67, both hemispheres 626.4
2620 Female, age 94, left hemisphere 614.6
1867 Male, age 76, both hemispheres 584.3
2436 Male, age 74, both hemispheres 567.9
2137 Male, age 80, left hemisphere 545.8
Parahippocampal cortex
nTPM: 585.4
2692 Male, age 74, both hemispheres 657.0
2018 Male, age 76, both hemispheres 606.4
1933 Female, age 85, both hemispheres 595.3
1990 Female, age 91, right hemisphere 580.5
2622 Female, age 67, right hemisphere 580.0
2532 Female, age 72, left hemisphere 577.3
2245 Female, age 91, both hemispheres 575.4
1850 Male, age 80, both hemispheres 574.0
2693 Female, age 94, both hemispheres 562.7
2250 Female, age 67, right hemisphere 545.8
Perirhinal gyrus
nTPM: 553.5
1794 Male, age 80, right hemisphere 571.8
1841 Female, age 85, right hemisphere 556.7
2521 Female, age 94, right hemisphere 551.3
2848 Male, age 76, right hemisphere 546.8
1847 Female, age 91, left hemisphere 541.0
Subiculum
nTPM: 641.7
2042 Male, age 76, both hemispheres 675.1
2729 Female, age 91, right hemisphere 668.6
2619 Male, age 74, both hemispheres 656.6
1901 Male, age 80, both hemispheres 650.2
1977 Female, age 85, both hemispheres 601.2
2438 Female, age 94, left hemisphere 598.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 504.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 504.2
Samples: 197

Max nTPM: 1209.4
Min nTPM: 186.0
Std nTPM: 180.4
Median nTPM: 483.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1209.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1176.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1156.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 933.9
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 900.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 882.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 876.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 873.5
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 865.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 854.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 848.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 658.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 658.5
FF:10153-102I9 76 years, female 889.0
FF:10169-103B7 60 years, female 427.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 188.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 188.1
Samples: 4

Max nTPM: 264.6
Min nTPM: 75.3
Sample A Female 251.9
Sample B Female 160.6
Sample C Male 264.6
Sample D Male 75.3
Entorhinal cortex
nTPM: 89.8
Samples: 4

Max nTPM: 123.0
Min nTPM: 75.8
Sample A Female 75.8
Sample B Female 123.0
Sample C Male 80.4
Sample D Male 79.8
Subiculum
nTPM: 94.6
Samples: 4

Max nTPM: 119.1
Min nTPM: 72.5
Sample A Female 119.1
Sample B Female 109.5
Sample C Male 77.2
Sample D Male 72.5
Ventral hippocampus
nTPM: 143.8
Samples: 4

Max nTPM: 171.7
Min nTPM: 107.4
Sample A Female 138.5
Sample B Female 107.4
Sample C Male 171.7
Sample D Male 157.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 308.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 265.7
Samples: 4

Max nTPM: 325.5
Min nTPM: 203.0
Sample A Male 325.5
Sample B Male 259.7
Sample C Female 274.7
Sample D Female 203.0
Hippocampal formation
nTPM: 308.4
Samples: 4

Max nTPM: 355.8
Min nTPM: 277.4
Sample A Male 296.4
Sample B Male 277.4
Sample C Female 355.8
Sample D Female 304.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68269598 Antisense, RP_041129_01_H05, Mouse strain C57BL/6J (56 days, male) 4.2
2130 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 3.4
2129 Antisense, RP_Baylor_102712, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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