COLON - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:55.6 nTPM
HPA:55.6 nTPM
GTEx:42.3 nTPM
FANTOM5:51.7 Scaled Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average nTPM 55.6
overview
Male, age 54 		Colon sample 67
nTPM: 53.4
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 50.3
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 57.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 48.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 53.1
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 60.9
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 67
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 55
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 51.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 60.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 60.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 45.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 58.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 37.7
Samples: 373

Max nTPM: 55.2
Min nTPM: 26.3
Std nTPM: 5.0
Median nTPM: 37.5
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 55.2
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 53.5
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 52.7
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 52.5
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 50.3
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 49.6
GTEX-1RLM8-1726-SM-E9TKF 50-59 years, male 49.6
GTEX-1F5PL-1926-SM-7MXTP 40-49 years, female 49.3
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 48.1
GTEX-15UF6-2726-SM-7KULY 70-79 years, female 48.1
GTEX-14PN3-1926-SM-6EU1Y 60-69 years, female 47.8
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Colon - Transverse
Average nTPM: 42.3
Samples: 406

Max nTPM: 93.0
Min nTPM: 25.5
Std nTPM: 7.8
Median nTPM: 41.6
GTEX-14JIY-3326-SM-6871E 60-69 years, male 93.0
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 71.2
GTEX-14PK6-1726-SM-6871J 70-79 years, female 71.1
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 68.3
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 62.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 60.2
GTEX-1JKYN-2326-SM-CGQG7 30-39 years, male 60.1
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 58.7
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 58.6
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 58.3
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 58.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 51.7
FF:10014-101C5 62,83,84 years, mixed 51.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.