HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.5 nTPM
HPA:48.5 nTPM
GTEx:71.3 nTPM
FANTOM5:67.2 Scaled Tags Per Million
Pig:77.0 nTPM
Mouse:87.3 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006292
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.5
Sample id Sample description nTPM
Hippocampus
nTPM: 37.8
2621 Female, age 67, right hemisphere 55.9
2148 Female, age 91, left hemisphere 42.0
2529 Female, age 94, left hemisphere 35.7
1911 Female, age 85, right hemisphere 34.4
1855 Male, age 76, left hemisphere 31.4
1898 Male, age 80, left hemisphere 27.2
Dentate gyrus
nTPM: 37.3
2531 Female, age 67, both hemispheres 70.1
1927 Female, age 91, both hemispheres 38.6
2246 Female, age 85, both hemispheres 35.3
2528 Male, age 74, both hemispheres 30.3
2530 Female, age 94, left hemisphere 26.6
2010 Male, age 76, both hemispheres 23.1
Entorhinal gyrus
nTPM: 41.2
2613 Female, age 94, left hemisphere 72.8
2686 Male, age 75, right hemisphere 45.1
1787 Male, age 76, left hemisphere 38.5
2764 Male, age 80, right hemisphere 36.7
1938 Female, age 85, left hemisphere 36.4
2117 Female, age 91, right hemisphere 17.8
Hippocampus, CA1
nTPM: 39.7
2749 Male, age 80, left hemisphere 52.1
2045 Male, age 76, both hemispheres 45.3
2527 Male, age 74, both hemispheres 45.0
1873 Female, age 85, both hemispheres 29.9
2082 Female, age 91, right hemisphere 26.2
Hippocampus, CA2
nTPM: 28.7
2437 Female, age 94, left hemisphere 35.5
1892 Male, age 76, both hemispheres 31.9
2113 Female, age 91, right hemisphere 29.9
1963 Male, age 80, left hemisphere 26.2
2249 Male, age 74, both hemispheres 24.8
1940 Female, age 85, left hemisphere 23.6
Hippocampus, CA3
nTPM: 48.5
2861 Female, age 67, both hemispheres 79.0
2137 Male, age 80, left hemisphere 65.3
2620 Female, age 94, left hemisphere 65.3
1867 Male, age 76, both hemispheres 29.9
2436 Male, age 74, both hemispheres 28.7
1891 Female, age 85, both hemispheres 23.1
Parahippocampal cortex
nTPM: 39.9
2245 Female, age 91, both hemispheres 65.4
2693 Female, age 94, both hemispheres 49.6
2622 Female, age 67, right hemisphere 48.5
2250 Female, age 67, right hemisphere 44.1
2692 Male, age 74, both hemispheres 38.5
1933 Female, age 85, both hemispheres 37.9
2532 Female, age 72, left hemisphere 31.0
1850 Male, age 80, both hemispheres 29.0
2018 Male, age 76, both hemispheres 27.7
1990 Female, age 91, right hemisphere 27.0
Perirhinal gyrus
nTPM: 43.5
2521 Female, age 94, right hemisphere 66.8
1847 Female, age 91, left hemisphere 48.8
1794 Male, age 80, right hemisphere 34.7
2848 Male, age 76, right hemisphere 34.7
1841 Female, age 85, right hemisphere 32.3
Subiculum
nTPM: 29.9
2619 Male, age 74, both hemispheres 39.6
2438 Female, age 94, left hemisphere 32.8
1901 Male, age 80, both hemispheres 31.3
1977 Female, age 85, both hemispheres 28.8
2729 Female, age 91, right hemisphere 26.2
2042 Male, age 76, both hemispheres 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.3
Samples: 197

Max nTPM: 214.9
Min nTPM: 1.6
Std nTPM: 41.1
Median nTPM: 69.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 214.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 196.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 182.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 173.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 173.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 162.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 157.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 155.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 154.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 147.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.2
FF:10153-102I9 76 years, female 69.5
FF:10169-103B7 60 years, female 64.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 66.3
Samples: 4

Max nTPM: 73.8
Min nTPM: 51.6
Sample A Female 73.8
Sample B Female 73.2
Sample C Male 51.6
Sample D Male 66.7
Entorhinal cortex
nTPM: 75.2
Samples: 4

Max nTPM: 90.7
Min nTPM: 62.5
Sample A Female 80.7
Sample B Female 62.5
Sample C Male 90.7
Sample D Male 67.0
Subiculum
nTPM: 77.1
Samples: 4

Max nTPM: 104.7
Min nTPM: 60.1
Sample A Female 104.7
Sample B Female 69.6
Sample C Male 73.8
Sample D Male 60.1
Ventral hippocampus
nTPM: 69.0
Samples: 4

Max nTPM: 86.0
Min nTPM: 53.0
Sample A Female 53.0
Sample B Female 53.5
Sample C Male 86.0
Sample D Male 83.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.3
Samples: 4

Max nTPM: 91.8
Min nTPM: 79.0
Sample A Male 91.8
Sample B Male 79.0
Sample C Female 90.9
Sample D Female 79.5
Hippocampal formation
nTPM: 87.3
Samples: 4

Max nTPM: 116.3
Min nTPM: 65.5
Sample A Male 116.3
Sample B Male 89.8
Sample C Female 65.5
Sample D Female 77.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
74641324 Antisense, RP_060220_02_F01, Mouse strain C57BL/6J (56 days, male) 11.2
69837860 Antisense, RP_050222_02_D10, Mouse strain C57BL/6J (56 days, male) 10.6

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The Human Protein Atlas

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